CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
vacuole 2
mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0714900-01	Rice	plasma membrane	96.12	95.65
Zm00001d011717_P001	Maize	mitochondrion	86.41	94.68
TraesCS3D01G248400.1	Wheat	mitochondrion	94.66	94.66
TraesCS3B01G277200.1	Wheat	mitochondrion	94.66	94.66
TraesCS3A01G248600.1	Wheat	mitochondrion	94.17	94.17
GSMUA_Achr7P23940_001	Banana	plasma membrane	85.92	86.34
OQU78358	Sorghum	cytosol	84.47	84.47
VIT_18s0001g02250.t01	Wine grape	mitochondrion	83.98	84.39
Solyc04g072060.2.1	Tomato	plastid	82.52	83.33
KRH35042	Soybean	mitochondrion	83.01	83.01
KRG91731	Soybean	mitochondrion	82.52	82.52
AT1G22740.1	Thale cress	mitochondrion	79.13	80.3
CDY48910	Canola	mitochondrion	79.13	79.13
Bra038371.1-P	Field mustard	mitochondrion	79.13	79.13
CDX91688	Canola	mitochondrion	78.64	79.02
CDY41473	Canola	mitochondrion	78.64	79.02
Bra000689.1-P	Field mustard	mitochondrion	78.16	78.16
CDX90732	Canola	mitochondrion	78.16	78.16
CDY05073	Canola	mitochondrion	77.67	77.67
AT4G09720.3	Thale cress	mitochondrion	81.07	76.96
EES18509	Sorghum	mitochondrion	74.76	74.76
EES02212	Sorghum	mitochondrion	71.36	71.01
PGSC0003DMT400079981	Potato	mitochondrion	78.16	63.89
VIT_18s0001g02330.t01	Wine grape	cytosol	33.98	57.38
Bra016372.1-P	Field mustard	plastid	79.13	46.7

Protein Annotations

MapMan:22.8.1.7	Gene3D:3.40.50.300	EntrezGene:8069790	UniProt:C5XIA1	EnsemblPlants:EES03521	ProteinID:EES03521
ProteinID:EES03521.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005525	GO:GO:0016787	ProteinID:OQU87420.1	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449
PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF586	SMART:SM00173	SMART:SM00174	SMART:SM00175
SMART:SM00176	EnsemblPlantsGene:SORBI_3003G276100	SUPFAM:SSF52540	unigene:Sbi.10058	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase
TIGRFAMs:TIGR00231	UniParc:UPI0001A84CEF	RefSeq:XP_002458401.1	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:61256805..61263005

Molecular Weight (calculated)

23201.3 Da

IEP (calculated)

5.344

GRAVY (calculated)

-0.377

Length

206 amino acids

Sequence
(BLAST)

001: MSTSRRRTLL KVIVLGDSGV GKTSLMNQYV HKKFSQQYKA TIGADFVTKE VLIEDRLVTL QIWDTAGQER FQSLGVAFYR GADCCVLVYD VNSNRSFDTL
101: NTWHDEFLNQ ASPSDPKTFP FILLGNKIDV DGGKSRVVSD KKAMEWCASK GNIPYFETSA KEDYNVDNAF LTVAKLALEH ERDQDIYFQS VTDPVPETEQ
201: RSGCAC

Best Arabidopsis Sequence Match ( AT4G09720.1 )
(BLAST)

001: MATRRRTLLK VIVLGDSGVG KTSLMNQYVH KKFSMQYKAT IGADFVTKEL QIGEKLVTLQ IWDTAGQERF QSLGAAFYRG ADCCALVYDV NVLRSFDNLE
101: TWHEEFLKQA SPSDPKTFPF IVLGNKIDVD GGSSRVVSDK KAADWCASNG NIPYFETSAK DDFNVDEAFL TIAKTALANE HEQDIYFQGI PDAVTENEPK
201: GGGCAC

Arabidopsis Description

ATRABG3ARAB GTPase homolog G3A [Source:UniProtKB/TrEMBL;Acc:F4JKR6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.