Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- vacuole 2
- mitochondrion 5
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| extracellular:
25047395
plasma membrane: 27800704 plasma membrane: 28056797 |
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID:
25047395
doi
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang, South Korea.
msms PMID:
28056797
doi
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES03521 | Sorghum | mitochondrion | 95.65 | 96.12 |
| TraesCS3D01G248400.1 | Wheat | mitochondrion | 95.17 | 95.63 |
| TraesCS3B01G277200.1 | Wheat | mitochondrion | 95.17 | 95.63 |
| TraesCS3A01G248600.1 | Wheat | mitochondrion | 94.69 | 95.15 |
| Zm00001d011717_P001 | Maize | mitochondrion | 83.57 | 92.02 |
| GSMUA_Achr7P23940_001 | Banana | plasma membrane | 85.02 | 85.85 |
| Os05t0536900-01 | Rice | plastid | 84.06 | 84.47 |
| Solyc04g072060.2.1 | Tomato | plastid | 83.09 | 84.31 |
| VIT_18s0001g02250.t01 | Wine grape | mitochondrion | 82.61 | 83.41 |
| KRH35042 | Soybean | mitochondrion | 82.61 | 83.01 |
| KRG91731 | Soybean | mitochondrion | 82.13 | 82.52 |
| AT1G22740.1 | Thale cress | mitochondrion | 78.74 | 80.3 |
| CDY41473 | Canola | mitochondrion | 78.26 | 79.02 |
| CDX91688 | Canola | mitochondrion | 78.26 | 79.02 |
| CDY48910 | Canola | mitochondrion | 78.26 | 78.64 |
| Bra038371.1-P | Field mustard | mitochondrion | 78.26 | 78.64 |
| CDX90732 | Canola | mitochondrion | 77.29 | 77.67 |
| Bra000689.1-P | Field mustard | mitochondrion | 77.29 | 77.67 |
| CDY05073 | Canola | mitochondrion | 76.81 | 77.18 |
| AT4G09720.3 | Thale cress | mitochondrion | 79.71 | 76.04 |
| Os05t0516600-01 | Rice | plasma membrane | 74.4 | 74.76 |
| Os01t0227300-01 | Rice | plasma membrane | 72.46 | 72.46 |
| PGSC0003DMT400079981 | Potato | mitochondrion | 78.74 | 64.68 |
| VIT_18s0001g02330.t01 | Wine grape | cytosol | 32.85 | 55.74 |
| Bra016372.1-P | Field mustard | plastid | 78.74 | 46.7 |
Protein Annotations
| MapMan:22.8.1.7 | Gene3D:3.40.50.300 | EntrezGene:4325946 | EMBL:AK111495 | ProteinID:BAD87568.1 | ProteinID:BAF05974.1 |
| ProteinID:BAS74016.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003824 | GO:GO:0003924 |
| GO:GO:0005488 | GO:GO:0005525 | GO:GO:0008270 | GO:GO:0016787 | EnsemblPlantsGene:Os01g0714900 | EnsemblPlants:Os01t0714900-01 |
| InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF586 |
| UniProt:Q5JLU1 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SMART:SM00176 | SUPFAM:SSF52540 |
| InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI00004C2A01 | RefSeq:XP_015632387.1 | : |
Description
small GTP-binding protein OsRab7A2Similar to RAB7A. (Os01t0714900-01)
Coordinates
chr1:-:29730171..29735065
Molecular Weight (calculated)
23262.5 Da
IEP (calculated)
5.764
GRAVY (calculated)
-0.362
Length
207 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTSRRRTLL KVIVLGDSGV GKTSLMNQYV HKKFSQQYKA TIGADFVTKE VLIEDRLVTL QIWDTAGQER FQSLGVAFYR GADCCVLVYD VNSNRSFDTL
101: NTWHDEFLNQ ASPSDPKTFP FILLGNKIDV DGGKSRVVSE KKAMEWCSSK GNIPYFETSA KEDRNVDSAF LSVAKLALEH ERDQDIYFQT VVPDPVPEAE
201: QRSGCAC
101: NTWHDEFLNQ ASPSDPKTFP FILLGNKIDV DGGKSRVVSE KKAMEWCSSK GNIPYFETSA KEDRNVDSAF LSVAKLALEH ERDQDIYFQT VVPDPVPEAE
201: QRSGCAC
001: MATRRRTLLK VIVLGDSGVG KTSLMNQYVH KKFSMQYKAT IGADFVTKEL QIGEKLVTLQ IWDTAGQERF QSLGAAFYRG ADCCALVYDV NVLRSFDNLE
101: TWHEEFLKQA SPSDPKTFPF IVLGNKIDVD GGSSRVVSDK KAADWCASNG NIPYFETSAK DDFNVDEAFL TIAKTALANE HEQDIYFQGI PDAVTENEPK
201: GGGCAC
101: TWHEEFLKQA SPSDPKTFPF IVLGNKIDVD GGSSRVVSDK KAADWCASNG NIPYFETSAK DDFNVDEAFL TIAKTALANE HEQDIYFQGI PDAVTENEPK
201: GGGCAC
Arabidopsis Description
ATRABG3ARAB GTPase homolog G3A [Source:UniProtKB/TrEMBL;Acc:F4JKR6]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.