CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra000689.1-P	Field mustard	mitochondrion	99.51	99.51
CDY05073	Canola	mitochondrion	98.54	98.54
CDY48910	Canola	mitochondrion	91.26	91.26
AT4G09720.3	Thale cress	mitochondrion	89.81	85.25
KRH35042	Soybean	mitochondrion	83.01	83.01
VIT_18s0001g02250.t01	Wine grape	mitochondrion	82.52	82.93
KRG91731	Soybean	mitochondrion	82.52	82.52
Solyc04g072060.2.1	Tomato	plastid	81.55	82.35
CDY41473	Canola	mitochondrion	79.13	79.51
TraesCS3A01G248600.1	Wheat	mitochondrion	79.13	79.13
CDX91688	Canola	mitochondrion	78.64	79.02
TraesCS3D01G248400.1	Wheat	mitochondrion	78.64	78.64
TraesCS3B01G277200.1	Wheat	mitochondrion	78.64	78.64
EES03521	Sorghum	mitochondrion	78.16	78.16
Os01t0714900-01	Rice	plasma membrane	77.67	77.29
GSMUA_Achr7P23940_001	Banana	plasma membrane	75.73	76.1
Zm00001d011717_P001	Maize	mitochondrion	68.93	75.53
OQU78358	Sorghum	cytosol	74.76	74.76
Os05t0536900-01	Rice	plastid	73.3	73.3
TraesCS1B01G374600.1	Wheat	mitochondrion	73.3	72.6
TraesCS1D01G362800.1	Wheat	mitochondrion	72.82	72.12
TraesCS1A01G358000.1	Wheat	mitochondrion	72.82	72.12
Zm00001d038842_P001	Maize	cytosol	61.65	70.17
CDY18548	Canola	plasma membrane	69.9	69.9
CDX95493	Canola	mitochondrion	69.9	69.9
CDX82324	Canola	mitochondrion	69.9	69.9
CDY61984	Canola	mitochondrion	69.42	69.42
CDX92277	Canola	mitochondrion	69.42	69.42
CDX99311	Canola	mitochondrion	69.42	69.42
CDX87890	Canola	mitochondrion	67.48	67.48
CDY02549	Canola	mitochondrion	67.48	67.48
CDY52980	Canola	mitochondrion	67.48	67.48
CDY47530	Canola	mitochondrion	67.48	67.48
CDY45632	Canola	mitochondrion	67.48	67.48
CDY68571	Canola	mitochondrion	66.99	66.99
CDY16487	Canola	mitochondrion	66.99	66.99
CDY46234	Canola	cytosol	67.96	66.67
CDX77257	Canola	mitochondrion	66.5	66.5
CDY15859	Canola	cytosol	67.48	66.19
CDX76964	Canola	cytosol	65.53	64.9
PGSC0003DMT400079981	Potato	mitochondrion	76.21	62.3
HORVU1Hr1G080330.4	Barley	endoplasmic reticulum	63.59	60.93
CDY63374	Canola	mitochondrion	46.12	56.21
Zm00001d036915_P002	Maize	cytosol	18.93	55.71
Zm00001d024267_P001	Maize	cytosol	29.61	54.95
VIT_18s0001g02330.t01	Wine grape	cytosol	32.52	54.92
CDY56814	Canola	cytosol	44.66	54.76
CDY31983	Canola	endoplasmic reticulum, extracellular, golgi	43.2	54.6
CDX76258	Canola	cytosol	27.18	53.33
Zm00001d039546_P002	Maize	cytosol	31.07	46.04
Zm00001d040564_P001	Maize	cytosol	32.52	44.37
Zm00001d047173_P001	Maize	cytosol	32.52	44.37
CDX76260	Canola	cytosol	27.18	44.09
Zm00001d028382_P003	Maize	cytosol	36.89	41.76
Zm00001d016749_P001	Maize	cytosol	34.47	36.98

Protein Annotations

MapMan:22.8.1.7	Gene3D:3.40.50.300	GO:A0A078DP23	EnsemblPlants:CDX90732	ProteinID:CDX90732	ProteinID:CDX90732.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525
GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00151420001	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419
PANTHER:PTHR24073	PANTHER:PTHR24073:SF586	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176
SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI0004EE465A	:

Description

BnaA03g24120D

Coordinates

chrLK031864:+:226986..228837

Molecular Weight (calculated)

22529.6 Da

IEP (calculated)

4.886

GRAVY (calculated)

-0.187

Length

206 amino acids

Sequence
(BLAST)

001: MATRRRTLLK VIVLGDSGVG KTSLMNQYVH KKFSLQYKAT IGADFVTKEL QIGDKLVTLQ IWDTAGQERF QSLGAAFYRG ADCCALVYDV NVAKSFDSLE
101: TWHEEFLKQA SPADPKTFPF IVLGNKVDIG GGSTRVVSET KAADWCASNG SIPYFETSAK EDYNVDEAFF TIAKTALANE NDQDIYFQGI PAVVPENEPK
201: GGGCAC

Best Arabidopsis Sequence Match ( AT4G09720.1 )
(BLAST)

001: MATRRRTLLK VIVLGDSGVG KTSLMNQYVH KKFSMQYKAT IGADFVTKEL QIGEKLVTLQ IWDTAGQERF QSLGAAFYRG ADCCALVYDV NVLRSFDNLE
101: TWHEEFLKQA SPSDPKTFPF IVLGNKIDVD GGSSRVVSDK KAADWCASNG NIPYFETSAK DDFNVDEAFL TIAKTALANE HEQDIYFQGI PDAVTENEPK
201: GGGCAC

Arabidopsis Description

ATRABG3ARAB GTPase homolog G3A [Source:UniProtKB/TrEMBL;Acc:F4JKR6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.