Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- extracellular 1
- endoplasmic reticulum 2
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G362800.1 | Wheat | mitochondrion | 83.72 | 86.54 |
| TraesCS1B01G374600.1 | Wheat | mitochondrion | 83.26 | 86.06 |
| TraesCS1A01G358000.1 | Wheat | mitochondrion | 82.33 | 85.1 |
| Zm00001d038842_P001 | Maize | cytosol | 68.84 | 81.77 |
| OQU78358 | Sorghum | cytosol | 73.95 | 77.18 |
| Os05t0536900-01 | Rice | plastid | 72.09 | 75.24 |
| KRG91731 | Soybean | mitochondrion | 65.12 | 67.96 |
| VIT_18s0001g02250.t01 | Wine grape | mitochondrion | 64.65 | 67.8 |
| Zm00001d024267_P001 | Maize | cytosol | 34.88 | 67.57 |
| KRH35042 | Soybean | mitochondrion | 64.65 | 67.48 |
| Solyc04g072060.2.1 | Tomato | plastid | 63.72 | 67.16 |
| GSMUA_Achr7P23940_001 | Banana | plasma membrane | 63.72 | 66.83 |
| AT1G22740.1 | Thale cress | mitochondrion | 62.79 | 66.5 |
| Zm00001d036915_P002 | Maize | cytosol | 21.4 | 65.71 |
| CDY41473 | Canola | mitochondrion | 62.33 | 65.37 |
| CDX91688 | Canola | mitochondrion | 62.33 | 65.37 |
| HORVU1Hr1G076530.1 | Barley | mitochondrion | 59.53 | 64.65 |
| CDY48910 | Canola | mitochondrion | 61.4 | 64.08 |
| Bra038371.1-P | Field mustard | mitochondrion | 61.4 | 64.08 |
| CDY05073 | Canola | mitochondrion | 60.93 | 63.59 |
| CDX90732 | Canola | mitochondrion | 60.93 | 63.59 |
| Bra000689.1-P | Field mustard | mitochondrion | 60.93 | 63.59 |
| HORVU3Hr1G030910.4 | Barley | mitochondrion | 44.19 | 63.33 |
| HORVU3Hr1G071820.1 | Barley | mitochondrion | 59.07 | 61.65 |
| AT4G09720.3 | Thale cress | mitochondrion | 61.86 | 61.29 |
| Zm00001d040564_P001 | Maize | cytosol | 37.67 | 53.64 |
| Zm00001d047173_P001 | Maize | cytosol | 37.67 | 53.64 |
| PGSC0003DMT400079981 | Potato | mitochondrion | 62.33 | 53.17 |
| Zm00001d028382_P003 | Maize | cytosol | 41.86 | 49.45 |
| VIT_18s0001g02330.t01 | Wine grape | cytosol | 27.44 | 48.36 |
| Zm00001d039546_P002 | Maize | cytosol | 28.84 | 44.6 |
| Zm00001d016749_P001 | Maize | cytosol | 39.07 | 43.75 |
| HORVU3Hr1G067530.5 | Barley | plastid | 40.93 | 41.31 |
| Bra016372.1-P | Field mustard | plastid | 63.72 | 39.26 |
Protein Annotations
| MapMan:22.8.1.7 | Gene3D:3.40.50.300 | UniProt:A0A287GFQ5 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | EnsemblPlantsGene:HORVU1Hr1G080330 | EnsemblPlants:HORVU1Hr1G080330.4 |
| InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF479 |
| SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SMART:SM00176 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom |
| InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI000B473C31 | : | : | : |
Description
No Description!
Coordinates
chrchr1H:+:525024223..525026148
Molecular Weight (calculated)
24060.6 Da
IEP (calculated)
5.063
GRAVY (calculated)
-0.175
Length
215 amino acids
Sequence
(BLAST)
(BLAST)
001: GSVPFTPSFL CFQSMAAVSM PVSDLGIVWL PPVFRVGKTS LMNQYVNKKF SQQYKATIGA DFLTKEVLIE DRLVTLQIWD TAGQERFQSL GVAFYRGADC
101: CVLVYDVNAK RTFNTLGTWH DEFINQAGPS DPKQFPFILV GNKVDLDSGS RRVVPEKKAK DWCVAKGDIP YFETSAKDDC NVDTAFLCIA KLALEHEHDQ
201: DIYFNSVAEQ GPKPE
101: CVLVYDVNAK RTFNTLGTWH DEFINQAGPS DPKQFPFILV GNKVDLDSGS RRVVPEKKAK DWCVAKGDIP YFETSAKDDC NVDTAFLCIA KLALEHEHDQ
201: DIYFNSVAEQ GPKPE
001: MSTRRRTLLK VIILGDSGVG KTSLMNQYVN NKFSQQYKAT IGADFVTKEL QIDDRLVTLQ IWDTAGQERF QSLGVAFYRG ADCCVLVYDV NHLKSFESLD
101: NWHNEFLTRA SPRDPMAFPF ILLGNKVDID GGNSRVVSEK KAREWCAEKG NIVYFETSAK EDYNVDDSFL CITKLALANE RDQDIYFQPD TGSVPEQRGG
201: CAC
101: NWHNEFLTRA SPRDPMAFPF ILLGNKVDID GGNSRVVSEK KAREWCAEKG NIVYFETSAK EDYNVDDSFL CITKLALANE RDQDIYFQPD TGSVPEQRGG
201: CAC
Arabidopsis Description
RABG3BRas-related protein RABG3b [Source:UniProtKB/Swiss-Prot;Acc:O04157]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.