CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18548	Canola	plasma membrane	99.51	99.51
Bra037557.1-P	Field mustard	cytosol	87.86	99.45
CDX92277	Canola	mitochondrion	98.54	98.54
CDX99311	Canola	mitochondrion	98.06	98.06
CDY61984	Canola	mitochondrion	97.57	97.57
CDX82324	Canola	mitochondrion	97.09	97.09
AT3G18820.1	Thale cress	mitochondrion	96.6	96.6
KRH24485	Soybean	mitochondrion	95.15	95.15
KRH29476	Soybean	mitochondrion	95.15	95.15
VIT_03s0063g02420.t01	Wine grape	extracellular	95.15	95.15
PGSC0003DMT400001904	Potato	mitochondrion	94.66	94.66
Solyc01g109520.2.1	Tomato	plastid	94.66	94.66
CDY16487	Canola	mitochondrion	92.23	92.23
CDX77257	Canola	mitochondrion	91.75	91.75
HORVU1Hr1G076530.1	Barley	mitochondrion	87.38	90.91
Os05t0516600-01	Rice	plasma membrane	90.78	90.78
EES18509	Sorghum	mitochondrion	90.29	90.29
TraesCS1A01G337800.1	Wheat	plastid	89.81	89.81
TraesCS1B01G350200.1	Wheat	mitochondrion	89.81	89.81
TraesCS1D01G339700.2	Wheat	mitochondrion	89.81	89.81
TraesCS3D01G290000.1	Wheat	mitochondrion	89.32	89.32
TraesCS3A01G290200.1	Wheat	mitochondrion	89.32	89.32
TraesCS3B01G324900.1	Wheat	golgi	89.32	89.32
HORVU3Hr1G071820.1	Barley	mitochondrion	89.32	89.32
Zm00001d038709_P001	Maize	mitochondrion	90.29	89.0
CDY52980	Canola	mitochondrion	86.89	86.89
CDY47530	Canola	mitochondrion	86.89	86.89
CDY02549	Canola	mitochondrion	86.89	86.89
Zm00001d010733_P002	Maize	plasma membrane	89.81	86.85
CDY45632	Canola	mitochondrion	86.41	86.41
CDX87890	Canola	mitochondrion	86.41	86.41
CDY68571	Canola	mitochondrion	85.92	85.92
CDY56814	Canola	cytosol	63.59	77.98
CDX76258	Canola	cytosol	37.86	74.29
CDY48910	Canola	mitochondrion	71.84	71.84
CDY41473	Canola	mitochondrion	70.87	71.22
CDX91688	Canola	mitochondrion	70.87	71.22
CDX90732	Canola	mitochondrion	69.9	69.9
CDY05073	Canola	mitochondrion	69.42	69.42
CDX76260	Canola	cytosol	40.78	66.14
CDY31983	Canola	endoplasmic reticulum, extracellular, golgi	51.46	65.03
CDX76964	Canola	cytosol	65.05	64.42
CDY15859	Canola	cytosol	65.53	64.29
CDY46234	Canola	cytosol	65.53	64.29
CDY63374	Canola	mitochondrion	45.63	55.62

Protein Annotations

MapMan:22.8.1.7	Gene3D:3.40.50.300	GO:A0A078E7Z0	EnsemblPlants:CDX95493	ProteinID:CDX95493	ProteinID:CDX95493.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525
GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00101293001	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419
PANTHER:PTHR24073	PANTHER:PTHR24073:SF663	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176
SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI00019AA8DD	:

Description

BnaC01g33850D

Coordinates

chrLK031889:-:684206..686185

Molecular Weight (calculated)

23061.1 Da

IEP (calculated)

4.713

GRAVY (calculated)

-0.432

Length

206 amino acids

Sequence
(BLAST)

001: MPSRRRTLLK VIILGDSGVG KTSLMNQYVN KKFSNQYKAT IGADFLTKEV QFEDRLFTLQ IWDTAGQERF QSLGVAFYRG ADCCVLVYDV NSMKSFDNLN
101: NWREEFLIQA SPSDPENFPF VVIGNKVDVD GGNSRVVSEK KAKAWCASKG NIPYFETSAK EGTNVEEAFE CIAKNALKTG EEEELYLPDT IDVGTSNQQR
201: STGCEC

Best Arabidopsis Sequence Match ( AT3G18820.1 )
(BLAST)

001: MPSRRRTLLK VIILGDSGVG KTSLMNQYVN KKFSNQYKAT IGADFLTKEV QFEDRLFTLQ IWDTAGQERF QSLGVAFYRG ADCCVLVYDV NSMKSFENLN
101: NWREEFLIQA SPSDPENFPF VLIGNKVDVD DGNSRVVSEK KAKAWCASKG NIPYFETSAK VGTNVEEAFQ CIAKDALKSG EEEELYLPDT IDVGTSNQQR
201: STGCEC

Arabidopsis Description

RABG3FRas-related protein RABG3f [Source:UniProtKB/Swiss-Prot;Acc:Q9LS94]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.