CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82324	Canola	mitochondrion	99.51	99.51
CDX92277	Canola	mitochondrion	98.06	98.06
CDX99311	Canola	mitochondrion	97.57	97.57
CDX95493	Canola	mitochondrion	97.57	97.57
AT3G18820.1	Thale cress	mitochondrion	97.09	97.09
CDY18548	Canola	plasma membrane	97.09	97.09
VIT_03s0063g02420.t01	Wine grape	extracellular	94.66	94.66
KRH29476	Soybean	mitochondrion	94.66	94.66
KRH24485	Soybean	mitochondrion	94.66	94.66
PGSC0003DMT400001904	Potato	mitochondrion	94.66	94.66
Solyc01g109520.2.1	Tomato	plastid	94.66	94.66
HORVU1Hr1G076530.1	Barley	mitochondrion	87.86	91.41
Os05t0516600-01	Rice	plasma membrane	91.26	91.26
CDY16487	Canola	mitochondrion	91.26	91.26
CDX77257	Canola	mitochondrion	90.78	90.78
EES18509	Sorghum	mitochondrion	90.78	90.78
TraesCS1D01G339700.2	Wheat	mitochondrion	90.29	90.29
TraesCS1B01G350200.1	Wheat	mitochondrion	90.29	90.29
TraesCS1A01G337800.1	Wheat	plastid	90.29	90.29
TraesCS3B01G324900.1	Wheat	golgi	89.81	89.81
TraesCS3A01G290200.1	Wheat	mitochondrion	89.81	89.81
TraesCS3D01G290000.1	Wheat	mitochondrion	89.81	89.81
Zm00001d038709_P001	Maize	mitochondrion	90.78	89.47
HORVU3Hr1G071820.1	Barley	mitochondrion	89.32	89.32
Zm00001d010733_P002	Maize	plasma membrane	90.29	87.32
CDX87890	Canola	mitochondrion	85.44	85.44
CDY52980	Canola	mitochondrion	85.44	85.44
CDY02549	Canola	mitochondrion	85.44	85.44
CDY47530	Canola	mitochondrion	85.44	85.44
CDY45632	Canola	mitochondrion	85.44	85.44
CDY68571	Canola	mitochondrion	84.47	84.47
CDY56814	Canola	cytosol	62.62	76.79
CDX76258	Canola	cytosol	37.38	73.33
CDY48910	Canola	mitochondrion	71.36	71.36
CDY41473	Canola	mitochondrion	70.39	70.73
CDX91688	Canola	mitochondrion	70.39	70.73
CDX90732	Canola	mitochondrion	69.42	69.42
CDY05073	Canola	mitochondrion	68.93	68.93
CDX76964	Canola	cytosol	66.02	65.38
CDY46234	Canola	cytosol	66.5	65.24
CDY15859	Canola	cytosol	66.5	65.24
CDY31983	Canola	endoplasmic reticulum, extracellular, golgi	51.46	65.03
CDX76260	Canola	cytosol	39.32	63.78
CDY63374	Canola	mitochondrion	46.6	56.8

Protein Annotations

MapMan:22.8.1.7	Gene3D:3.40.50.300	GO:A0A078J9Z3	UniProt:A0A078J9Z3	EnsemblPlants:CDY61984	ProteinID:CDY61984
ProteinID:CDY61984.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00034666001	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449
PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF663	SMART:SM00173	SMART:SM00174	SMART:SM00175
SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI0004EE95E9

Description

BnaC03g73830DBnaC03g73830D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J9Z3]

Coordinates

chrLK034073:+:24387..26429

Molecular Weight (calculated)

23043.1 Da

IEP (calculated)

4.814

GRAVY (calculated)

-0.425

Length

206 amino acids

Sequence
(BLAST)

001: MPSRRRTLLK VIILGDSGVG KTSLMNQYVN KKFSNQYKAT IGADFLTKEV QFEDRLFTLQ IWDTAGQERF QSLGVAFYRG ADCCVLVYDV NSMKSFENLN
101: NWREEFLIQA SPSDPENFPF VLIGNKVDVD GGNSRVVSEK KAKAWCASKG NIPYFETSAK EGTNVEEAFQ CIAKNALKTG EEEELYLPDT IDVGTSNQPR
201: SSGCEC

Best Arabidopsis Sequence Match ( AT3G18820.1 )
(BLAST)

001: MPSRRRTLLK VIILGDSGVG KTSLMNQYVN KKFSNQYKAT IGADFLTKEV QFEDRLFTLQ IWDTAGQERF QSLGVAFYRG ADCCVLVYDV NSMKSFENLN
101: NWREEFLIQA SPSDPENFPF VLIGNKVDVD DGNSRVVSEK KAKAWCASKG NIPYFETSAK VGTNVEEAFQ CIAKDALKSG EEEELYLPDT IDVGTSNQQR
201: STGCEC

Arabidopsis Description

RABG3FRas-related protein RABG3f [Source:UniProtKB/Swiss-Prot;Acc:Q9LS94]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.