Factsheet for TraesCS3A01G152300.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid, secretory
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G030910.4	Barley	mitochondrion	75.14	92.67
TraesCS3B01G179400.1	Wheat	plastid	99.46	88.89
TraesCS3D01G160100.2	Wheat	plastid	98.92	88.41
EES02212	Sorghum	mitochondrion	96.76	86.47
Os01t0227300-01	Rice	plasma membrane	96.22	85.99
GSMUA_Achr7P14370_001	Banana	mitochondrion	92.97	83.09
GSMUA_Achr8P19790_001	Banana	mitochondrion	92.43	82.61
VIT_09s0002g04220.t01	Wine grape	mitochondrion	92.43	82.61
Solyc03g120750.2.1	Tomato	nucleus, unclear	91.35	82.44
PGSC0003DMT400006517	Potato	mitochondrion	91.35	82.44
KRH47027	Soybean	endoplasmic reticulum	91.89	82.13
KRH44355	Soybean	mitochondrion	91.89	82.13
GSMUA_Achr5P06890_001	Banana	mitochondrion	91.89	81.73
CDY52980	Canola	mitochondrion	89.73	80.58
Bra014320.1-P	Field mustard	mitochondrion	89.73	80.58
Bra018959.1-P	Field mustard	mitochondrion	89.73	80.58
AT1G52280.1	Thale cress	mitochondrion	89.73	80.58
CDY02549	Canola	mitochondrion	89.73	80.58
CDY47530	Canola	mitochondrion	89.73	80.58
CDX87890	Canola	mitochondrion	89.19	80.1
Bra030395.1-P	Field mustard	mitochondrion	89.19	80.1
CDY45632	Canola	mitochondrion	89.19	80.1
TraesCS1A01G337800.1	Wheat	plastid	88.65	79.61
CDY68571	Canola	mitochondrion	88.65	79.61
AT3G16100.1	Thale cress	mitochondrion	88.65	79.61
GSMUA_Achr9P05540_001	Banana	mitochondrion	88.65	79.23
TraesCS3A01G290200.1	Wheat	mitochondrion	88.11	79.13
TraesCS3A01G248600.1	Wheat	mitochondrion	77.84	69.9
TraesCS1A01G358000.1	Wheat	mitochondrion	73.51	65.38

Protein Annotations

MapMan:22.8.1.7	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449
PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF663	SMART:SM00173	SMART:SM00174	SMART:SM00175
SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	EnsemblPlantsGene:TraesCS3A01G152300
EnsemblPlants:TraesCS3A01G152300.1	TIGR:cd01862	:	:	:	:

Description

No Description!

Coordinates

chr3A:+:142896653..142899931

Molecular Weight (calculated)

20846.7 Da

IEP (calculated)

5.408

GRAVY (calculated)

-0.359

Length

185 amino acids

Sequence
(BLAST)

001: MASRRRMLLK VIILGDSGVG KTSLMNQYVN NKFSNQYKAT IGADFLTKEV KIDDRLFTLQ IWDTAGQERF QSLGVAFYRG ADCCVLVYDV NVTKSFEKLN
101: NWREEFLIQA SPSDPENFPF VLLGNKIDVD GGNSRTVSEK KAKAWCASKG NIPYFETSAK EGFNVEAAFE CIARNAIKNE PEEDM

Best Arabidopsis Sequence Match ( AT1G49300.1 )
(BLAST)

001: MPSRRRTLLK VIILGDSGVG KTSLMNQYVN KKFSNQYKAT IGADFLTKEV QFEDRLFTLQ IWDTAGQERF QSLGVAFYRG ADCCVLVYDV NSAKSFEDLN
101: NWREEFLIQA SPSDPENFPF VVIGNKIDVD GGSSRVVSEK KARAWCASKG NIPYYETSAK VGTNVEDAFL CITTNAMKSG EEEEMYLPDT IDVGTSNPQR
201: STGCEC

Arabidopsis Description

RABG3ERas-related protein RABG3e [Source:UniProtKB/Swiss-Prot;Acc:Q9XI98]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.