Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- mitochondrion 3
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY52980 | Canola | mitochondrion | 98.54 | 98.54 |
| Bra018959.1-P | Field mustard | mitochondrion | 98.54 | 98.54 |
| CDY47530 | Canola | mitochondrion | 98.06 | 98.06 |
| CDY45632 | Canola | mitochondrion | 98.06 | 98.06 |
| CDY02549 | Canola | mitochondrion | 98.06 | 98.06 |
| Bra014320.1-P | Field mustard | mitochondrion | 98.06 | 98.06 |
| Bra030395.1-P | Field mustard | mitochondrion | 98.06 | 98.06 |
| CDX87890 | Canola | mitochondrion | 98.06 | 98.06 |
| CDY68571 | Canola | mitochondrion | 97.57 | 97.57 |
| AT3G16100.1 | Thale cress | mitochondrion | 94.17 | 94.17 |
| VIT_09s0002g04220.t01 | Wine grape | mitochondrion | 92.72 | 92.27 |
| Solyc03g120750.2.1 | Tomato | nucleus, unclear | 91.75 | 92.2 |
| PGSC0003DMT400006517 | Potato | mitochondrion | 91.75 | 92.2 |
| KRH47027 | Soybean | endoplasmic reticulum | 91.75 | 91.3 |
| KRH44355 | Soybean | mitochondrion | 91.75 | 91.3 |
| TraesCS3A01G152300.1 | Wheat | mitochondrion | 80.58 | 89.73 |
| GSMUA_Achr5P06890_001 | Banana | mitochondrion | 90.29 | 89.42 |
| Os01t0227300-01 | Rice | plasma membrane | 89.81 | 89.37 |
| GSMUA_Achr7P14370_001 | Banana | mitochondrion | 89.81 | 89.37 |
| GSMUA_Achr9P05540_001 | Banana | mitochondrion | 89.81 | 89.37 |
| GSMUA_Achr8P19790_001 | Banana | mitochondrion | 89.32 | 88.89 |
| EES02212 | Sorghum | mitochondrion | 88.83 | 88.41 |
| TraesCS3B01G179400.1 | Wheat | plastid | 88.35 | 87.92 |
| TraesCS3D01G160100.2 | Wheat | plastid | 87.86 | 87.44 |
| AT3G18820.1 | Thale cress | mitochondrion | 85.44 | 85.44 |
| HORVU3Hr1G030910.4 | Barley | mitochondrion | 61.65 | 84.67 |
| AT1G49300.1 | Thale cress | mitochondrion | 84.47 | 84.47 |
| AT1G22740.1 | Thale cress | mitochondrion | 71.84 | 72.91 |
| AT4G09720.3 | Thale cress | mitochondrion | 70.87 | 67.28 |
| AT2G21880.1 | Thale cress | cytosol | 66.02 | 64.15 |
| AT5G39620.1 | Thale cress | cytosol | 51.46 | 51.96 |
Protein Annotations
| MapMan:22.8.1.7 | Gene3D:3.40.50.300 | EntrezGene:841658 | ProteinID:AAG51552.1 | EMBL:AB071847 | ProteinID:AEE32777.1 |
| ArrayExpress:AT1G52280 | EnsemblPlantsGene:AT1G52280 | RefSeq:AT1G52280 | TAIR:AT1G52280 | RefSeq:AT1G52280-TAIR-G | EnsemblPlants:AT1G52280.1 |
| TAIR:AT1G52280.1 | EMBL:AY074361 | EMBL:AY096407 | Symbol:AtRABG3d | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0005794 | GO:GO:0005886 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016787 | RefSeq:NP_175638.1 |
| InterPro:P-loop_NTPase | PFAM:PF00071 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF663 | UniProt:Q9C820 |
| SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SMART:SM00176 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom |
| InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI00000A8487 | : | : | : |
Description
RABG3DRas-related protein RABG3d [Source:UniProtKB/Swiss-Prot;Acc:Q9C820]
Coordinates
chr1:-:19467815..19469586
Molecular Weight (calculated)
23070.2 Da
IEP (calculated)
4.937
GRAVY (calculated)
-0.386
Length
206 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSRRRVLLK VIILGDSGVG KTSLMNQFVN RKFSNQYKAT IGADFLTKEV QIDDRIFTLQ IWDTAGQERF QSLGVAFYRG ADCCVLVYDV NVMKSFDNLN
101: NWREEFLIQA SPSDPENFPF VVLGNKTDVD GGKSRVVSEK KAKAWCASKG NIPYFETSAK EGFNVDAAFE CITKNAFKNE PEEEPYLPDT IDVAGGQQQR
201: STGCEC
101: NWREEFLIQA SPSDPENFPF VVLGNKTDVD GGKSRVVSEK KAKAWCASKG NIPYFETSAK EGFNVDAAFE CITKNAFKNE PEEEPYLPDT IDVAGGQQQR
201: STGCEC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.