Factsheet for AT5G45510.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra025075.1-P	Field mustard	cytosol	32.24	60.71
CDY38973	Canola	cytosol	29.95	58.84
Bra021982.1-P	Field mustard	nucleus	51.8	55.58
CDX87776	Canola	cytosol	51.15	55.21
CDY26368	Canola	nucleus	51.23	54.62
CDY39429	Canola	cytosol	9.74	40.2
AT4G19050.1	Thale cress	cytosol	35.84	36.47
EES01603	Sorghum	mitochondrion	14.48	19.73
GSMUA_Achr1P08700_001	Banana	cytosol, nucleus, peroxisome	13.75	19.65
TraesCS3D01G086600.1	Wheat	mitochondrion	14.4	19.64
TraesCS3B01G101700.1	Wheat	mitochondrion	14.32	19.49
Os01t0799100-01	Rice	cytosol	15.63	19.37
TraesCS3B01G359000.1	Wheat	cytosol	13.5	19.21
Zm00001d043197_P001	Maize	mitochondrion	4.58	18.73
TraesCS3A01G086300.1	Wheat	mitochondrion	4.17	18.35

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	EntrezGene:834587	ProteinID:AED95262.1	ProteinID:AED95263.1	EMBL:AK316919
ArrayExpress:AT5G45510	EnsemblPlantsGene:AT5G45510	RefSeq:AT5G45510	TAIR:AT5G45510	RefSeq:AT5G45510-TAIR-G	EnsemblPlants:AT5G45510.1
TAIR:AT5G45510.1	EMBL:AY065063	Unigene:At.22832	ProteinID:BAB09179.1	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0005886	GO:GO:0006950	GO:GO:0006952	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	InterPro:IPR032675	InterPro:LRR_dom_sf
RefSeq:NP_001078719.1	RefSeq:NP_199364.2	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293
PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064
PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611
PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010
PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137
PO:PO:0025022	PO:PO:0025281	PRINTS:PR00364	PANTHER:PTHR43906	UniProt:Q8VZC7	SUPFAM:SSF52058
UniParc:UPI0000162825	SEG:seg	:	:	:	:

Description

Probable disease resistance protein At5g45510 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZC7]

Coordinates

chr5:+:18444607..18449446

Molecular Weight (calculated)

137933.0 Da

IEP (calculated)

4.975

GRAVY (calculated)

-0.475

Length

1222 amino acids

Sequence
(BLAST)

0001: MSDPLKMAAE TEEIKPVPAA MGEKKDVVLC KKIVETLGGG GDQRVLLVGE AGIGKTRMAQ MVDKEASKDV LCYQTLWLHL NRKFKVNDNY IKEKKFEDEW
0101: SLYENIASQL SLYSDFEETE VGERDEDEEE EKKVEDLLKD LKPKIEKYLL EKKEAVVKKL EDDKKKKEKE AAEKLEAEKK LVDPAAKKAK DHGNKNPTDA
0201: AKEKTTQVVA GGEDKAQTSS ERKPYLLLIL DDEGMTSEYE VMVHLGLEDF LKDHTPRKIL ITRRQETEEA TKSGEHAEGE ANDSQSGEKK EDTDGEDEIR
0301: SADKEEPESQ ARVKTEEKHE KVVPPTIDDL WGSTNTYGEI TFQTTNESQD LLESFNLKEA EALFTSSMFF KDMPNFFFDP VPGTDEKLLN HMLKKSKSLP
0401: AAINVLAKSL EYTVKSKSYK LNKDEEERLL KEKIEMVLSA ERGNPSDQES SSESPKKASG ENPILLLAYK LFKTDGPLKD TILDCFWHSL DFFEHCGCVY
0501: YRDLITQWIL EGYFDPVRSV EKAYQDGHSI FMELIDRGML KIQENNVVVP EMAMRNVIDP RRGGHLGKSR LGFSRVYGGN KRKGIGKITQ LDDMIKTVQA
0601: KKGDKITTIL VSGDRLRRVT PKKFFKNLKE LEVLGLFEPT VKPFVPSFSD QLKLLRVLII RDCDLLKSIE ELKALTKLNT LEVSGASSLS KISEKFFESF
0701: PELRSLHLSG LKIESSPPSI SGLKELHCLI IKDCPLLQDL PNIQELVNLE VVDVSGASGL RTCFDNADGA KKNKSKNKNF YLLTKLQHLD FSGSQIERLP
0801: IFQDSAVAAK LHSLTRLLLR NCSKLRRLPS LKPLSGLQIL DLSGTTSLVE MLEVCFEDKL ELKTLNLSGT NLSELATTIE DLSSLNELLL RDCINLDAIP
0901: NIEKLENLEV IDVSGSAKLA KIEGSFEKMF YLRVVDLSGT QVETPELPAD TKIHCLKRFT RADGKCFERD TWREIKEDIE RDRSENASSS DAVVISQEIT
1001: EKKPVEIREV ESNAPRASDC TEKVDVNKER LLKVPIDRAL YQKALTSLVD SKIPQEEVLE INETNKLDEE ALASAEFVSF VDCTPERVKS IFEKAKLVKG
1101: CWLRMCFDIK DPFDGVDEEN LKSLETLSIT NLLSLETISF IAKLENLKNL SLDCCPKIKT IFPEMPASLP VLNLKHCENL EKVVVGVEVS THTNLDLKVE
1201: NCPKFGDYVM VDHSDVPPPH EC

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.