Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- peroxisome 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES01603 | Sorghum | mitochondrion | 41.29 | 39.35 |
| TraesCS3D01G086600.1 | Wheat | mitochondrion | 39.42 | 37.61 |
| Zm00001d043197_P001 | Maize | mitochondrion | 13.1 | 37.46 |
| TraesCS3B01G101700.1 | Wheat | mitochondrion | 38.95 | 37.08 |
| TraesCS3B01G359000.1 | Wheat | cytosol | 37.19 | 37.02 |
| Os01t0799100-01 | Rice | cytosol | 41.29 | 35.8 |
| TraesCS3A01G086300.1 | Wheat | mitochondrion | 11.58 | 35.61 |
| CDY39429 | Canola | cytosol | 9.47 | 27.36 |
| CDY38973 | Canola | cytosol | 12.98 | 17.85 |
| Bra025075.1-P | Field mustard | cytosol | 13.1 | 17.26 |
| CDY69261 | Canola | cytosol | 21.17 | 16.09 |
| AT4G19050.1 | Thale cress | cytosol | 21.99 | 15.65 |
| Bra013372.1-P | Field mustard | cytosol | 20.58 | 15.28 |
| CDX78917 | Canola | extracellular | 20.47 | 15.18 |
| Bra021982.1-P | Field mustard | nucleus | 20.0 | 15.01 |
| CDX87776 | Canola | cytosol | 19.42 | 14.66 |
| CDY26368 | Canola | nucleus | 19.65 | 14.66 |
| AT5G45510.1 | Thale cress | nucleus | 19.65 | 13.75 |
Protein Annotations
| Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0043531 | EnsemblPlantsGene:GSMUA_Achr1G08700_001 | EnsemblPlants:GSMUA_Achr1P08700_001 | EnsemblPlants:GSMUA_Achr1T08700_001 | InterPro:IPR001611 |
| InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | UniProt:M0RY78 | InterPro:NB-ARC | InterPro:P-loop_NTPase |
| PFAM:PF00931 | PRINTS:PR00364 | PFscan:PS51450 | PANTHER:PTHR43909 | SUPFAM:SSF52058 | SUPFAM:SSF52540 |
| UniParc:UPI000294CDA0 | SEG:seg | : | : | : | : |
Description
NB-ARC/LRR disease resistance protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G08700_001]
Coordinates
chr1:-:6618776..6621409
Molecular Weight (calculated)
97805.0 Da
IEP (calculated)
6.679
GRAVY (calculated)
-0.112
Length
855 amino acids
Sequence
(BLAST)
(BLAST)
001: MATGERSIQH LMEEITNPDV GTVVVHGISG LGKTWTARQA YGRAMASPLF DVFLWISLSV TCTKRRARQK ILESLSIVVE DNGDEERVTE KIHSFLSGRR
101: FLLVLDDAWF TEDRMLATLG VPTPRHNASK VVVTTRTMRT QTVMEPDVVI QQSSLSRKES WDLFCQISGH SIVNRFGQMV VEGSHGMPLL IVLMAGALKD
201: SITDSANEEL TAKVSSALLN EVTAARFAYS MLPDDEVKHC LVYCLLFPGD MALHDDELIQ YWLMDGLIAE GYLSVAATDK AQKILLLLLH RRLLYRDDDD
301: HVRMHEAVRE VLMDTGRQRG DHGYSCATHS EGLTSIWFPD GRNKRISLME SSTDRLPQIP QSFLSSLFLR GIRWLKVIPN SFFDNRQILT LSVLDLSFTA
401: ITNLPSSTSN LANLQYLLLK GCEHLEELRN IRSLRNLLVL DASGCSALRT ISPGSFAMMN MLRVLDLSRT SIESFPSLSR LPELRCLFLR GCRRINFQEK
501: FPYGITKTGH LLSLKLCTES NAVDWNVMQW LQAGLTWDEH AGVYASINTC VDDNRSYLSV SNTSFFQYLD KDSPLWDNCF LRFHIRVCPS EEANRDSEFV
601: FQNENFVFRE TYFGTKYCSH PPNACRFLEI HHVRPWGIGG VLHHADVVFL NDVKLVKQLS DFELQNLRGM RECWIQRCDQ MESIFTAELE DVSEVLSLEK
701: LWISNLEKLS FLFAGVEKET NFTSLKHIHI DCCPNLVGLF CSTLRFQNLE TLQIRFCDKL ESVYDHSVIG EEAFPRLHTL RLWELPELKS VCGGILPCLK
801: HLKVKECPKL KALPVGVNDM TPIAIIRGER QWWNNLTWED ERIKSHLLFR RWGRF
101: FLLVLDDAWF TEDRMLATLG VPTPRHNASK VVVTTRTMRT QTVMEPDVVI QQSSLSRKES WDLFCQISGH SIVNRFGQMV VEGSHGMPLL IVLMAGALKD
201: SITDSANEEL TAKVSSALLN EVTAARFAYS MLPDDEVKHC LVYCLLFPGD MALHDDELIQ YWLMDGLIAE GYLSVAATDK AQKILLLLLH RRLLYRDDDD
301: HVRMHEAVRE VLMDTGRQRG DHGYSCATHS EGLTSIWFPD GRNKRISLME SSTDRLPQIP QSFLSSLFLR GIRWLKVIPN SFFDNRQILT LSVLDLSFTA
401: ITNLPSSTSN LANLQYLLLK GCEHLEELRN IRSLRNLLVL DASGCSALRT ISPGSFAMMN MLRVLDLSRT SIESFPSLSR LPELRCLFLR GCRRINFQEK
501: FPYGITKTGH LLSLKLCTES NAVDWNVMQW LQAGLTWDEH AGVYASINTC VDDNRSYLSV SNTSFFQYLD KDSPLWDNCF LRFHIRVCPS EEANRDSEFV
601: FQNENFVFRE TYFGTKYCSH PPNACRFLEI HHVRPWGIGG VLHHADVVFL NDVKLVKQLS DFELQNLRGM RECWIQRCDQ MESIFTAELE DVSEVLSLEK
701: LWISNLEKLS FLFAGVEKET NFTSLKHIHI DCCPNLVGLF CSTLRFQNLE TLQIRFCDKL ESVYDHSVIG EEAFPRLHTL RLWELPELKS VCGGILPCLK
801: HLKVKECPKL KALPVGVNDM TPIAIIRGER QWWNNLTWED ERIKSHLLFR RWGRF
001: MECCAPVIGE ILRLMYESTF SRVANAIKFK SNVKALNESL ERLTELKGNM SEDHETLLTK DKPLRLKLMR WQREAEEVIS KARLKLEERV SCGMSLRPRM
101: SRKLVKILDE VKMLEKDGIE FVDMLSVEST PERVEHVPGV SVVHQTMASN MLAKIRDGLT SEKAQKIGVW GMGGVGKTTL VRTLNNKLRE EGATQPFGLV
201: IFVIVSKEFD PREVQKQIAE RLDIDTQMEE SEEKLARRIY VGLMKERKFL LILDDVWKPI DLDLLGIPRT EENKGSKVIL TSRFLEVCRS MKTDLDVRVD
301: CLLEEDAWEL FCKNAGDVVR SDHVRKIAKA VSQECGGLPL AIITVGTAMR GKKNVKLWNH VLSKLSKSVP WIKSIEEKIF QPLKLSYDFL EDKAKFCFLL
401: CALFPEDYSI EVTEVVRYWM AEGFMEELGS QEDSMNEGIT TVESLKDYCL LEDGDRRDTV KMHDVVRDFA IWIMSSSQDD SHSLVMSGTG LQDIRQDKLA
501: PSLRRVSLMN NKLESLPDLV EEFCVKTSVL LLQGNFLLKE VPIGFLQAFP TLRILNLSGT RIKSFPSCSL LRLFSLHSLF LRDCFKLVKL PSLETLAKLE
601: LLDLCGTHIL EFPRGLEELK RFRHLDLSRT LHLESIPARV VSRLSSLETL DMTSSHYRWS VQGETQKGQA TVEEIGCLQR LQVLSIRLHS SPFLLNKRNT
701: WIKRLKKFQL VVGSRYILRT RHDKRRLTIS HLNVSQVSIG WLLAYTTSLA LNHCQGIEAM MKKLVSDNKG FKNLKSLTIE NVIINTNSWV EMVSTNTSKQ
801: SSDILDLLPN LEELHLRRVD LETFSELQTH LGLKLETLKI IEITMCRKLR TLLDKRNFLT IPNLEEIEIS YCDSLQNLHE ALLYHQPFVP NLRVLKLRNL
901: PNLVSICNWG EVWECLEQVE VIHCNQLNCL PISSTCGRIK KIKGELSWWE RLEWDDPSAL TTVQPFFNPV REVPLLIADA TTQML
101: SRKLVKILDE VKMLEKDGIE FVDMLSVEST PERVEHVPGV SVVHQTMASN MLAKIRDGLT SEKAQKIGVW GMGGVGKTTL VRTLNNKLRE EGATQPFGLV
201: IFVIVSKEFD PREVQKQIAE RLDIDTQMEE SEEKLARRIY VGLMKERKFL LILDDVWKPI DLDLLGIPRT EENKGSKVIL TSRFLEVCRS MKTDLDVRVD
301: CLLEEDAWEL FCKNAGDVVR SDHVRKIAKA VSQECGGLPL AIITVGTAMR GKKNVKLWNH VLSKLSKSVP WIKSIEEKIF QPLKLSYDFL EDKAKFCFLL
401: CALFPEDYSI EVTEVVRYWM AEGFMEELGS QEDSMNEGIT TVESLKDYCL LEDGDRRDTV KMHDVVRDFA IWIMSSSQDD SHSLVMSGTG LQDIRQDKLA
501: PSLRRVSLMN NKLESLPDLV EEFCVKTSVL LLQGNFLLKE VPIGFLQAFP TLRILNLSGT RIKSFPSCSL LRLFSLHSLF LRDCFKLVKL PSLETLAKLE
601: LLDLCGTHIL EFPRGLEELK RFRHLDLSRT LHLESIPARV VSRLSSLETL DMTSSHYRWS VQGETQKGQA TVEEIGCLQR LQVLSIRLHS SPFLLNKRNT
701: WIKRLKKFQL VVGSRYILRT RHDKRRLTIS HLNVSQVSIG WLLAYTTSLA LNHCQGIEAM MKKLVSDNKG FKNLKSLTIE NVIINTNSWV EMVSTNTSKQ
801: SSDILDLLPN LEELHLRRVD LETFSELQTH LGLKLETLKI IEITMCRKLR TLLDKRNFLT IPNLEEIEIS YCDSLQNLHE ALLYHQPFVP NLRVLKLRNL
901: PNLVSICNWG EVWECLEQVE VIHCNQLNCL PISSTCGRIK KIKGELSWWE RLEWDDPSAL TTVQPFFNPV REVPLLIADA TTQML
Arabidopsis Description
Disease resistance protein At4g27190 [Source:UniProtKB/Swiss-Prot;Acc:Q9T048]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.