CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
plasma membrane 1
cytosol 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043197_P001	Maize	mitochondrion	25.08	75.25
Os01t0799100-01	Rice	cytosol	64.44	58.62
TraesCS3A01G086300.1	Wheat	mitochondrion	17.95	57.91
TraesCS3B01G101700.1	Wheat	mitochondrion	54.85	54.79
TraesCS3D01G086600.1	Wheat	mitochondrion	54.4	54.46
TraesCS3B01G359000.1	Wheat	cytosol	50.17	52.39
GSMUA_Achr1P08700_001	Banana	cytosol, nucleus, peroxisome	39.35	41.29
CDY39429	Canola	cytosol	7.69	23.31
Bra025075.1-P	Field mustard	cytosol	13.04	18.03
CDY38973	Canola	cytosol	12.26	17.68
CDY69261	Canola	cytosol	20.62	16.44
AT4G19050.1	Thale cress	cytosol	21.85	16.32
CDX87776	Canola	cytosol	20.29	16.08
Bra021982.1-P	Field mustard	nucleus	20.4	16.07
Bra013372.1-P	Field mustard	cytosol	20.51	15.97
CDY26368	Canola	nucleus	20.4	15.97
CDX78917	Canola	extracellular	20.18	15.7
AT5G45510.1	Thale cress	nucleus	19.73	14.48

Protein Annotations

Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	EntrezGene:8082395	UniProt:C5XMF7	EnsemblPlants:EES01603
ProteinID:EES01603	ProteinID:EES01603.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006950	GO:GO:0006952	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf
InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931	PRINTS:PR00364	EnsemblPlantsGene:SORBI_3003G325300	SUPFAM:SSF52058
SUPFAM:SSF52540	UniParc:UPI0001A84484	RefSeq:XP_002456483.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:+:65156739..65160875

Molecular Weight (calculated)

101345.0 Da

IEP (calculated)

6.582

GRAVY (calculated)

0.082

Length

897 amino acids

Sequence
(BLAST)

001: MASYCCFWRP RQTTRFLSVQ NLIPVQSISF QDMLRLLVRP DVGVIVIQGI GGSGKTWAAK AAYRAAMTSN LFEEYVWVPL SMNCSMRQCI NKIAASLSCN
101: KGYNLSIERT KAIIKEHLTK RKFLLVLDNA YFTEESILEC LGVPRPQQQS LGSKIIVTTR TGRGESAMEP DIVLMPQPLT YEESYDLLRE KIGKDICFAH
201: DLISYCFGMP LTIVLLAGVL CDAPTQEAFD ELVAKAHVAL GAHISVFHTM ERMVKFGYHH LPSDNVRHCL LYCLLFPEHQ GIAVKELIWY WIMDGLLHKN
301: IGFDEANHIG KEILDVLIKH GMVYLDDNGH IRMHDVIRET VSRYGKDNGY NEQHDWHVSN PISIRLEHLA KSSRRVLLMD TEMECLYGSP SCSFISSLLL
401: RGNCLLRAMS EEFFCHMGLL GILDLSFTRI QVLPLSISRL TRLRMLLLIG CDYLKEIRHI TPLVRLEVLD ASGSGSLKSV GSGSFDHMVL LKVLDLSATS
501: ITFLTSIPVS MELRHLNLQG CPFLRSDLPY GVSKSGAVQN LWLGNVEDLA DLMDMLWLPC GLTFNLFNMH GLEVSLDANM GGRGTTCVYA SDAYFFNCLK
601: KDSPLWLNCF RKFQIVISCS MDCQTMDTDV QAMKKDSTFQ NSYFRTKRFA HSNEPNRYLE INGTIGVPSD LDGILGHAEL ISLKKLAMTT QSSDLNFSSM
701: EAVRELWVEN CDHLESFLTA EVVQALSAMG NLHSLWISNM ENLSSFCKGV EGVTSFSCLK HLLFDCCPNL ICLFPSVLHF PNLETLSIRF CDILERVFDN
801: SALGEDTLPR LQSLQLWELP ELTSVCSGVL PSLKNLKVRG CTKLRKIPVG VNENSPFVIT IGEQLWWDSL IWDDETIKRW LLFRNWRPLL PHIATEG

Best Arabidopsis Sequence Match ( AT4G27190.1 )
(BLAST)

001: MECCAPVIGE ILRLMYESTF SRVANAIKFK SNVKALNESL ERLTELKGNM SEDHETLLTK DKPLRLKLMR WQREAEEVIS KARLKLEERV SCGMSLRPRM
101: SRKLVKILDE VKMLEKDGIE FVDMLSVEST PERVEHVPGV SVVHQTMASN MLAKIRDGLT SEKAQKIGVW GMGGVGKTTL VRTLNNKLRE EGATQPFGLV
201: IFVIVSKEFD PREVQKQIAE RLDIDTQMEE SEEKLARRIY VGLMKERKFL LILDDVWKPI DLDLLGIPRT EENKGSKVIL TSRFLEVCRS MKTDLDVRVD
301: CLLEEDAWEL FCKNAGDVVR SDHVRKIAKA VSQECGGLPL AIITVGTAMR GKKNVKLWNH VLSKLSKSVP WIKSIEEKIF QPLKLSYDFL EDKAKFCFLL
401: CALFPEDYSI EVTEVVRYWM AEGFMEELGS QEDSMNEGIT TVESLKDYCL LEDGDRRDTV KMHDVVRDFA IWIMSSSQDD SHSLVMSGTG LQDIRQDKLA
501: PSLRRVSLMN NKLESLPDLV EEFCVKTSVL LLQGNFLLKE VPIGFLQAFP TLRILNLSGT RIKSFPSCSL LRLFSLHSLF LRDCFKLVKL PSLETLAKLE
601: LLDLCGTHIL EFPRGLEELK RFRHLDLSRT LHLESIPARV VSRLSSLETL DMTSSHYRWS VQGETQKGQA TVEEIGCLQR LQVLSIRLHS SPFLLNKRNT
701: WIKRLKKFQL VVGSRYILRT RHDKRRLTIS HLNVSQVSIG WLLAYTTSLA LNHCQGIEAM MKKLVSDNKG FKNLKSLTIE NVIINTNSWV EMVSTNTSKQ
801: SSDILDLLPN LEELHLRRVD LETFSELQTH LGLKLETLKI IEITMCRKLR TLLDKRNFLT IPNLEEIEIS YCDSLQNLHE ALLYHQPFVP NLRVLKLRNL
901: PNLVSICNWG EVWECLEQVE VIHCNQLNCL PISSTCGRIK KIKGELSWWE RLEWDDPSAL TTVQPFFNPV REVPLLIADA TTQML

Arabidopsis Description

Disease resistance protein At4g27190 [Source:UniProtKB/Swiss-Prot;Acc:Q9T048]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.