Factsheet for AT5G48390.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_07s0151g00680.t01	Wine grape	cytosol	57.16	62.14
KRH00987	Soybean	cytosol	31.3	59.19
Solyc09g042760.1.1	Tomato	cytosol	55.13	56.21
PGSC0003DMT400056391	Potato	cytosol	55.66	56.02
GSMUA_Achr8P32260_001	Banana	cytosol	47.97	46.63
TraesCS3D01G396500.2	Wheat	cytosol	39.21	38.35
TraesCS3B01G434600.2	Wheat	cytosol	39.0	38.14
KXG33862	Sorghum	cytosol	39.32	38.1
TraesCS3A01G401700.1	Wheat	cytosol	38.89	38.0
Zm00001d042558_P002	Maize	plastid	38.78	37.89
HORVU3Hr1G090150.26	Barley	cytosol	29.38	37.31
TraesCS5B01G255100.1	Wheat	cytosol, nucleus, plasma membrane	36.86	36.78
Os01t0890900-00	Rice	plastid	39.0	35.85

Protein Annotations

Gene3D:1.25.40.10	MapMan:13.3.6.5.1.5	EntrezGene:834894	EMBL:AB354634	ProteinID:AED95664.1	ArrayExpress:AT5G48390
EnsemblPlantsGene:AT5G48390	RefSeq:AT5G48390	TAIR:AT5G48390	RefSeq:AT5G48390-TAIR-G	EnsemblPlants:AT5G48390.1	TAIR:AT5G48390.1
Symbol:ATZIP4	Unigene:At.55431	UniProt:B0M1H3	ProteinID:BAA96959.1	EMBL:EF176583	GO:GO:0000003
GO:GO:0000712	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005694	GO:GO:0005737	GO:GO:0006139	GO:GO:0006259
GO:GO:0007049	GO:GO:0007129	GO:GO:0007131	GO:GO:0007140	GO:GO:0007143	GO:GO:0008150
GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016043	GO:GO:0051321
GO:GO:0071139	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	RefSeq:NP_199650.3	PFAM:PF08631
PO:PO:0000293	PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR31791	PANTHER:PTHR31791:SF8	SMART:SM00028
SUPFAM:SSF48452	InterPro:Spo22/ZIP4/TEX11	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI00016594DC

Description

ZIP4TPR repeat-containing protein ZIP4 [Source:UniProtKB/Swiss-Prot;Acc:B0M1H3]

Coordinates

chr5:+:19612020..19615383

Molecular Weight (calculated)

103749.0 Da

IEP (calculated)

7.044

GRAVY (calculated)

-0.074

Length

936 amino acids

Sequence
(BLAST)

001: MRIAEITTPD LRLHHRETDS HTHHPLLSEI ELLIQQSEAI SKDQPLPQSL PISLRQFLTR LSQLAPFPDN SFKLTIWKLS FRLWNACVDL ANAASLQSSL
101: TSAENIANLR HVAADMLFLA KDVTGVPSPT IKSSLFYYKT GLVYHSLKKF DLASDCFERA TEIVSKIDIA KISDAGEKKL FLDLNLARSR TAWEISDRNL
201: AVTLLNRAKN LLFGSPDHYK SLSNQFLAFG KSSLSRGDDD CSLNDALRLM NEALDLCEKG LGTAKTREDT TEFTAMRIKT LRFISAVHLQ KGEFENVIKC
301: VKVLRNGGNG SDGADQHASL PVLAMKAWLG LGRHSEAEKE LRGMVGNNDI PEAVWVSAVE AYFEVVGTAG AETAKGVFLG LLGRCHVSAK AALRVAHRVL
401: GESRGGDNGS RIRANVVAQL VSDERVVALF ASEAVTKERK AIHSVLWNSA SDHFRAKDYE TSAEMFEKSM LYIPHDIENR VFRAKGFRVL CLCYLGLSQL
501: DRALEYIEEA EKLEPNIACS FLKFKIYLQK KEHSCAIGQI DAMTSCLDFS PDYLSLSAHE AISCQALPVA VASLSKFLSF YISGKKMPTT EVVVFRTLVT
601: ILTQDIGSET EALNFMLQAQ SRASKLGTEC FFGLGETGKR EQNWFAATCW NLGSRCGKEK KYELCGEFLR LASEFYGYID TDESGEDKLM ICRSIILSVT
701: AMIALEKQTK SALTETQVKL AAELLVRAGK IMSSSLSDGK DCIMEPELIF MYTLLAYDIH GRLNNSAFQL LVVKTFAGSK SCHYNYLLQL GIFASQSPQS
801: NPDVSTFALN ECLSALIASA SPEYPTIALI IRKLISIASV HKGDTDDEEA ILKMYKQAYR IMVGLKEGEY PTEEGKWLAM TAWNRAALPV RLGQFETAKK
901: WLSIGLEIAD KVTGMDTYKA CMQDYLAGFQ TKVSSA

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.