Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400056391 | Potato | cytosol | 94.01 | 92.8 |
| VIT_07s0151g00680.t01 | Wine grape | cytosol | 58.28 | 62.14 |
| KRH00987 | Soybean | cytosol | 30.94 | 57.37 |
| AT5G48390.1 | Thale cress | cytosol | 56.21 | 55.13 |
| GSMUA_Achr8P32260_001 | Banana | cytosol | 48.91 | 46.63 |
| Zm00001d042558_P002 | Maize | plastid | 40.3 | 38.62 |
| TraesCS3A01G401700.1 | Wheat | cytosol | 39.54 | 37.89 |
| TraesCS3B01G434600.2 | Wheat | cytosol | 39.32 | 37.72 |
| KXG33862 | Sorghum | cytosol | 39.54 | 37.58 |
| TraesCS3D01G396500.2 | Wheat | cytosol | 39.11 | 37.51 |
| HORVU3Hr1G090150.26 | Barley | cytosol | 30.07 | 37.45 |
| Os01t0890900-00 | Rice | plastid | 40.96 | 36.94 |
| TraesCS5B01G255100.1 | Wheat | cytosol, nucleus, plasma membrane | 37.58 | 36.78 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:13.3.6.5.1.5 | GO:GO:0000003 | GO:GO:0000712 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005694 |
| GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0007049 | GO:GO:0007129 | GO:GO:0007131 |
| GO:GO:0007140 | GO:GO:0007143 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009507 | GO:GO:0009536 |
| GO:GO:0009987 | GO:GO:0016043 | GO:GO:0051321 | GO:GO:0071139 | InterPro:IPR011990 | UniProt:K4CSX8 |
| PFAM:PF08631 | PANTHER:PTHR31791 | PANTHER:PTHR31791:SF8 | SUPFAM:SSF48452 | EnsemblPlantsGene:Solyc09g042760.1 | EnsemblPlants:Solyc09g042760.1.1 |
| InterPro:Spo22/ZIP4/TEX11 | InterPro:TPR-like_helical_dom_sf | UniParc:UPI000276CB2E | SEG:seg | : | : |
Description
TPR repeat-containing protein ZIP4 [Source:Projected from Arabidopsis thaliana (AT5G48390) UniProtKB/Swiss-Prot;Acc:B0M1H3]
Coordinates
chr9:+:25703501..25706985
Molecular Weight (calculated)
102789.0 Da
IEP (calculated)
6.476
GRAVY (calculated)
-0.125
Length
918 amino acids
Sequence
(BLAST)
(BLAST)
001: MKIDDISSPE LHDDLRNQLC SQIESSIEDI ETYVPATAAL PDSFSTHLRH TLSQLNYLSP FPNSLKLHIW KLSYRLWNAC VDLSNSNAAS IQKHHEEHAK
101: LRQVSADLLF LAADVTGIPS PAFKSASFFY KTGLKWHDLR KFELANYCFE KASDLLSKVD ITNVSEYEEK KLLLDLNIAR SRTAWEVSDR NLAIALLSRS
201: KNLLFAFADN YKALANQYLM FGKAIVSKNE VSGVNEALKL MNEAFELCER GLKVVKSTGE TLALMELRSK TLRFLGASHL QRDEFESVLK CVKVLRDGEK
301: DQHPSLSVLA MKAWLGLGRF GEAEKELRGM VVDKGIPEGV WVSAVESYFQ VVGAAGAPAV KGVFLGLLGR CHVSADAAIR VVNKVIGDPA GGGEEARLRA
401: KVVSDLVSDD RILTLLNGDD ASKERTAMHA LLWNCAAEHF RSKDLQTSAD IFEKSMLYVP SDIDSRNLRA KGFRVLCLCY MGLSQLDRAQ EYINEAEKLE
501: PNIASAFLKF KIYLQKNECD GAITQVQALP SCLDFTTEFL SLAAHEAIAC RCLPVAVSSL SLLLNFYTTG KQMATTEVVV FRTLVTILAQ DPQNDSDILK
601: QMKRAHSRLR EMSVEDFFGK GEIGRRERNW FSVNAWNVGV KTGQENRYAI CAEFFRLASE FYGASIDEEK EGNHVMVCKS LIMTVYAIIS DEKLRTNTLL
701: ENEVKESISL LDRAGKMLTS NSTEYEKLEV IIEPNFLFVY TWCAFDLHSR LDDTGSQQLL LIKRFANLKC CNPKHLLQIG IDASQGPRSN HEVAIFALST
801: CLSTLLASPS PDYASVALIV RKLVSLRSSH GADTIDDATM ETYKQAYRIM VGLKEGEYPV EEAKWLSMTA WNRAAVPMRM AHMDEAKRWM SMGLELANKV
901: PGMQTYRSCM EDFIAGFE
101: LRQVSADLLF LAADVTGIPS PAFKSASFFY KTGLKWHDLR KFELANYCFE KASDLLSKVD ITNVSEYEEK KLLLDLNIAR SRTAWEVSDR NLAIALLSRS
201: KNLLFAFADN YKALANQYLM FGKAIVSKNE VSGVNEALKL MNEAFELCER GLKVVKSTGE TLALMELRSK TLRFLGASHL QRDEFESVLK CVKVLRDGEK
301: DQHPSLSVLA MKAWLGLGRF GEAEKELRGM VVDKGIPEGV WVSAVESYFQ VVGAAGAPAV KGVFLGLLGR CHVSADAAIR VVNKVIGDPA GGGEEARLRA
401: KVVSDLVSDD RILTLLNGDD ASKERTAMHA LLWNCAAEHF RSKDLQTSAD IFEKSMLYVP SDIDSRNLRA KGFRVLCLCY MGLSQLDRAQ EYINEAEKLE
501: PNIASAFLKF KIYLQKNECD GAITQVQALP SCLDFTTEFL SLAAHEAIAC RCLPVAVSSL SLLLNFYTTG KQMATTEVVV FRTLVTILAQ DPQNDSDILK
601: QMKRAHSRLR EMSVEDFFGK GEIGRRERNW FSVNAWNVGV KTGQENRYAI CAEFFRLASE FYGASIDEEK EGNHVMVCKS LIMTVYAIIS DEKLRTNTLL
701: ENEVKESISL LDRAGKMLTS NSTEYEKLEV IIEPNFLFVY TWCAFDLHSR LDDTGSQQLL LIKRFANLKC CNPKHLLQIG IDASQGPRSN HEVAIFALST
801: CLSTLLASPS PDYASVALIV RKLVSLRSSH GADTIDDATM ETYKQAYRIM VGLKEGEYPV EEAKWLSMTA WNRAAVPMRM AHMDEAKRWM SMGLELANKV
901: PGMQTYRSCM EDFIAGFE
001: MRIAEITTPD LRLHHRETDS HTHHPLLSEI ELLIQQSEAI SKDQPLPQSL PISLRQFLTR LSQLAPFPDN SFKLTIWKLS FRLWNACVDL ANAASLQSSL
101: TSAENIANLR HVAADMLFLA KDVTGVPSPT IKSSLFYYKT GLVYHSLKKF DLASDCFERA TEIVSKIDIA KISDAGEKKL FLDLNLARSR TAWEISDRNL
201: AVTLLNRAKN LLFGSPDHYK SLSNQFLAFG KSSLSRGDDD CSLNDALRLM NEALDLCEKG LGTAKTREDT TEFTAMRIKT LRFISAVHLQ KGEFENVIKC
301: VKVLRNGGNG SDGADQHASL PVLAMKAWLG LGRHSEAEKE LRGMVGNNDI PEAVWVSAVE AYFEVVGTAG AETAKGVFLG LLGRCHVSAK AALRVAHRVL
401: GESRGGDNGS RIRANVVAQL VSDERVVALF ASEAVTKERK AIHSVLWNSA SDHFRAKDYE TSAEMFEKSM LYIPHDIENR VFRAKGFRVL CLCYLGLSQL
501: DRALEYIEEA EKLEPNIACS FLKFKIYLQK KEHSCAIGQI DAMTSCLDFS PDYLSLSAHE AISCQALPVA VASLSKFLSF YISGKKMPTT EVVVFRTLVT
601: ILTQDIGSET EALNFMLQAQ SRASKLGTEC FFGLGETGKR EQNWFAATCW NLGSRCGKEK KYELCGEFLR LASEFYGYID TDESGEDKLM ICRSIILSVT
701: AMIALEKQTK SALTETQVKL AAELLVRAGK IMSSSLSDGK DCIMEPELIF MYTLLAYDIH GRLNNSAFQL LVVKTFAGSK SCHYNYLLQL GIFASQSPQS
801: NPDVSTFALN ECLSALIASA SPEYPTIALI IRKLISIASV HKGDTDDEEA ILKMYKQAYR IMVGLKEGEY PTEEGKWLAM TAWNRAALPV RLGQFETAKK
901: WLSIGLEIAD KVTGMDTYKA CMQDYLAGFQ TKVSSA
101: TSAENIANLR HVAADMLFLA KDVTGVPSPT IKSSLFYYKT GLVYHSLKKF DLASDCFERA TEIVSKIDIA KISDAGEKKL FLDLNLARSR TAWEISDRNL
201: AVTLLNRAKN LLFGSPDHYK SLSNQFLAFG KSSLSRGDDD CSLNDALRLM NEALDLCEKG LGTAKTREDT TEFTAMRIKT LRFISAVHLQ KGEFENVIKC
301: VKVLRNGGNG SDGADQHASL PVLAMKAWLG LGRHSEAEKE LRGMVGNNDI PEAVWVSAVE AYFEVVGTAG AETAKGVFLG LLGRCHVSAK AALRVAHRVL
401: GESRGGDNGS RIRANVVAQL VSDERVVALF ASEAVTKERK AIHSVLWNSA SDHFRAKDYE TSAEMFEKSM LYIPHDIENR VFRAKGFRVL CLCYLGLSQL
501: DRALEYIEEA EKLEPNIACS FLKFKIYLQK KEHSCAIGQI DAMTSCLDFS PDYLSLSAHE AISCQALPVA VASLSKFLSF YISGKKMPTT EVVVFRTLVT
601: ILTQDIGSET EALNFMLQAQ SRASKLGTEC FFGLGETGKR EQNWFAATCW NLGSRCGKEK KYELCGEFLR LASEFYGYID TDESGEDKLM ICRSIILSVT
701: AMIALEKQTK SALTETQVKL AAELLVRAGK IMSSSLSDGK DCIMEPELIF MYTLLAYDIH GRLNNSAFQL LVVKTFAGSK SCHYNYLLQL GIFASQSPQS
801: NPDVSTFALN ECLSALIASA SPEYPTIALI IRKLISIASV HKGDTDDEEA ILKMYKQAYR IMVGLKEGEY PTEEGKWLAM TAWNRAALPV RLGQFETAKK
901: WLSIGLEIAD KVTGMDTYKA CMQDYLAGFQ TKVSSA
Arabidopsis Description
ZIP4TPR repeat-containing protein ZIP4 [Source:UniProtKB/Swiss-Prot;Acc:B0M1H3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.