Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- plasma membrane 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G434600.2 | Wheat | cytosol | 89.34 | 87.57 |
| HORVU3Hr1G090150.26 | Barley | cytosol | 67.48 | 85.89 |
| TraesCS3D01G396500.2 | Wheat | cytosol | 86.35 | 84.64 |
| TraesCS3A01G401700.1 | Wheat | cytosol | 85.18 | 83.4 |
| Os01t0890900-00 | Rice | plastid | 66.31 | 61.1 |
| KXG33862 | Sorghum | cytosol | 62.26 | 60.46 |
| Zm00001d042558_P002 | Maize | plastid | 61.51 | 60.23 |
| GSMUA_Achr8P32260_001 | Banana | cytosol | 48.83 | 47.56 |
| KRH00987 | Soybean | cytosol | 23.35 | 44.24 |
| VIT_07s0151g00680.t01 | Wine grape | cytosol | 37.21 | 40.53 |
| PGSC0003DMT400056391 | Potato | cytosol | 37.53 | 37.85 |
| Solyc09g042760.1.1 | Tomato | cytosol | 36.78 | 37.58 |
| AT5G48390.1 | Thale cress | cytosol | 36.78 | 36.86 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G255100.1 | EnsemblPlantsGene:TraesCS5B01G255100 | Gene3D:1.25.40.10 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0007049 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0051321 | InterPro:IPR011990 |
| InterPro:Spo22/ZIP4/TEX11 | InterPro:TPR-like_helical_dom_sf | ncoils:Coil | PANTHER:PTHR31791 | PANTHER:PTHR31791:SF8 | PFAM:PF08631 |
| SEG:seg | SUPFAM:SSF48452 | MapMan:13.3.6.5.1.5 | : | : | : |
Description
No Description!
Coordinates
chr5B:+:437800053..437803223
Molecular Weight (calculated)
102268.0 Da
IEP (calculated)
7.774
GRAVY (calculated)
-0.086
Length
938 amino acids
Sequence
(BLAST)
(BLAST)
001: MTISELSELK RVVDLYDAPD PSPPEKLVAD FRRVLTNLGS AASSLTDALP RLQLYNLGNR LWKAVDKRAN SAALALGPSA RAAEAEVRQV APELLLLAGF
101: PVKAASFFLR AGQGWLDLGR VDLATACFDK ATPLVSALAT EDERRILLGL NLARARAASD AGDQSLAVAL LGRSKSLASL ASAPRKYTRS LAEGYLYVGE
201: ATLFAKPSDP AVVASMLLTE ALDLFQKLPR PPKKKKLASP SPSSSEQKGR CLRYLALEHH KAKEHADVLF FIHASRDLIG EADEHPSMGF MALHAWLGTG
301: NLAEAERELE RLMANANASE SLCVGAAEVY LASAGPEAAR KVLVALVARC CAGVAAAAVR VVTKVVDCGI GSPGRARAIG ELVSDERVVA LFDGPANTSH
401: RGAMHTLLWN CGFEHFNAKN YDICADLFET SMLYLSREEG SRVRRAQCLR VLAVCYLALQ RLDRAHEFVN EADKVEHNAH CAFMKIKIHL QKNDEDEAIK
501: QIKTMMGCID FNPVFLMLTT HEAIACKAVR VAVASLTFLL GLYSAGKPMP EREVTVLRTL IELLRREQGT EDEILKYSRR AKLRMSNLGV EGFFGNGPVG
601: ARELNWFAGN SWNMGRRVAK EQKYDLSAEF FELAAEFFGG ASNDEGDGNH PTLCKALIMS VTSMLKAEEL NNSPLLDSDV KKGVEMLSRA GKLLPSIWPS
701: GSVASDQAEA NIFLFLHTFY SYQLLDRMDT SAHPQQLQLV KNFASSKACT PSHLLVLGKA ASEGTPPNLL VAEFSLKASI KTALASHSPN YRVISAALRN
801: LACLAGLQDL SGSKSDAVYG VYRQAYQIVV GLREGEYPCE EGQWLAVSAW NKSYLARRLN QASVGIKWMK MGLDLSRHVE SMKKYIADME QCLEYFQKMI
901: HSEAGEHALL GKNPDEGSRQ EGAPSTSMSG SMSQPVLV
101: PVKAASFFLR AGQGWLDLGR VDLATACFDK ATPLVSALAT EDERRILLGL NLARARAASD AGDQSLAVAL LGRSKSLASL ASAPRKYTRS LAEGYLYVGE
201: ATLFAKPSDP AVVASMLLTE ALDLFQKLPR PPKKKKLASP SPSSSEQKGR CLRYLALEHH KAKEHADVLF FIHASRDLIG EADEHPSMGF MALHAWLGTG
301: NLAEAERELE RLMANANASE SLCVGAAEVY LASAGPEAAR KVLVALVARC CAGVAAAAVR VVTKVVDCGI GSPGRARAIG ELVSDERVVA LFDGPANTSH
401: RGAMHTLLWN CGFEHFNAKN YDICADLFET SMLYLSREEG SRVRRAQCLR VLAVCYLALQ RLDRAHEFVN EADKVEHNAH CAFMKIKIHL QKNDEDEAIK
501: QIKTMMGCID FNPVFLMLTT HEAIACKAVR VAVASLTFLL GLYSAGKPMP EREVTVLRTL IELLRREQGT EDEILKYSRR AKLRMSNLGV EGFFGNGPVG
601: ARELNWFAGN SWNMGRRVAK EQKYDLSAEF FELAAEFFGG ASNDEGDGNH PTLCKALIMS VTSMLKAEEL NNSPLLDSDV KKGVEMLSRA GKLLPSIWPS
701: GSVASDQAEA NIFLFLHTFY SYQLLDRMDT SAHPQQLQLV KNFASSKACT PSHLLVLGKA ASEGTPPNLL VAEFSLKASI KTALASHSPN YRVISAALRN
801: LACLAGLQDL SGSKSDAVYG VYRQAYQIVV GLREGEYPCE EGQWLAVSAW NKSYLARRLN QASVGIKWMK MGLDLSRHVE SMKKYIADME QCLEYFQKMI
901: HSEAGEHALL GKNPDEGSRQ EGAPSTSMSG SMSQPVLV
001: MRIAEITTPD LRLHHRETDS HTHHPLLSEI ELLIQQSEAI SKDQPLPQSL PISLRQFLTR LSQLAPFPDN SFKLTIWKLS FRLWNACVDL ANAASLQSSL
101: TSAENIANLR HVAADMLFLA KDVTGVPSPT IKSSLFYYKT GLVYHSLKKF DLASDCFERA TEIVSKIDIA KISDAGEKKL FLDLNLARSR TAWEISDRNL
201: AVTLLNRAKN LLFGSPDHYK SLSNQFLAFG KSSLSRGDDD CSLNDALRLM NEALDLCEKG LGTAKTREDT TEFTAMRIKT LRFISAVHLQ KGEFENVIKC
301: VKVLRNGGNG SDGADQHASL PVLAMKAWLG LGRHSEAEKE LRGMVGNNDI PEAVWVSAVE AYFEVVGTAG AETAKGVFLG LLGRCHVSAK AALRVAHRVL
401: GESRGGDNGS RIRANVVAQL VSDERVVALF ASEAVTKERK AIHSVLWNSA SDHFRAKDYE TSAEMFEKSM LYIPHDIENR VFRAKGFRVL CLCYLGLSQL
501: DRALEYIEEA EKLEPNIACS FLKFKIYLQK KEHSCAIGQI DAMTSCLDFS PDYLSLSAHE AISCQALPVA VASLSKFLSF YISGKKMPTT EVVVFRTLVT
601: ILTQDIGSET EALNFMLQAQ SRASKLGTEC FFGLGETGKR EQNWFAATCW NLGSRCGKEK KYELCGEFLR LASEFYGYID TDESGEDKLM ICRSIILSVT
701: AMIALEKQTK SALTETQVKL AAELLVRAGK IMSSSLSDGK DCIMEPELIF MYTLLAYDIH GRLNNSAFQL LVVKTFAGSK SCHYNYLLQL GIFASQSPQS
801: NPDVSTFALN ECLSALIASA SPEYPTIALI IRKLISIASV HKGDTDDEEA ILKMYKQAYR IMVGLKEGEY PTEEGKWLAM TAWNRAALPV RLGQFETAKK
901: WLSIGLEIAD KVTGMDTYKA CMQDYLAGFQ TKVSSA
101: TSAENIANLR HVAADMLFLA KDVTGVPSPT IKSSLFYYKT GLVYHSLKKF DLASDCFERA TEIVSKIDIA KISDAGEKKL FLDLNLARSR TAWEISDRNL
201: AVTLLNRAKN LLFGSPDHYK SLSNQFLAFG KSSLSRGDDD CSLNDALRLM NEALDLCEKG LGTAKTREDT TEFTAMRIKT LRFISAVHLQ KGEFENVIKC
301: VKVLRNGGNG SDGADQHASL PVLAMKAWLG LGRHSEAEKE LRGMVGNNDI PEAVWVSAVE AYFEVVGTAG AETAKGVFLG LLGRCHVSAK AALRVAHRVL
401: GESRGGDNGS RIRANVVAQL VSDERVVALF ASEAVTKERK AIHSVLWNSA SDHFRAKDYE TSAEMFEKSM LYIPHDIENR VFRAKGFRVL CLCYLGLSQL
501: DRALEYIEEA EKLEPNIACS FLKFKIYLQK KEHSCAIGQI DAMTSCLDFS PDYLSLSAHE AISCQALPVA VASLSKFLSF YISGKKMPTT EVVVFRTLVT
601: ILTQDIGSET EALNFMLQAQ SRASKLGTEC FFGLGETGKR EQNWFAATCW NLGSRCGKEK KYELCGEFLR LASEFYGYID TDESGEDKLM ICRSIILSVT
701: AMIALEKQTK SALTETQVKL AAELLVRAGK IMSSSLSDGK DCIMEPELIF MYTLLAYDIH GRLNNSAFQL LVVKTFAGSK SCHYNYLLQL GIFASQSPQS
801: NPDVSTFALN ECLSALIASA SPEYPTIALI IRKLISIASV HKGDTDDEEA ILKMYKQAYR IMVGLKEGEY PTEEGKWLAM TAWNRAALPV RLGQFETAKK
901: WLSIGLEIAD KVTGMDTYKA CMQDYLAGFQ TKVSSA
Arabidopsis Description
ZIP4TPR repeat-containing protein ZIP4 [Source:UniProtKB/Swiss-Prot;Acc:B0M1H3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.