Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- golgi 5
- endoplasmic reticulum 5
- plasma membrane 4
- vacuole 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra002629.1-P | Field mustard | extracellular | 62.67 | 64.38 |
| CDX80347 | Canola | extracellular | 62.67 | 64.38 |
| CDY69338 | Canola | extracellular | 62.67 | 64.38 |
| AT3G47295.1 | Thale cress | extracellular | 41.33 | 43.66 |
Protein Annotations
| MapMan:35.1 | EntrezGene:835979 | UniProt:A0A178UNK7 | EMBL:AB020755 | EMBL:AB304257 | ProteinID:AED97081.1 |
| ArrayExpress:AT5G58650 | EnsemblPlantsGene:AT5G58650 | RefSeq:AT5G58650 | TAIR:AT5G58650 | RefSeq:AT5G58650-TAIR-G | EnsemblPlants:AT5G58650.1 |
| TAIR:AT5G58650.1 | EMBL:AY052256 | EMBL:AY132002 | Unigene:At.7869 | GO:GO:0003674 | GO:GO:0005102 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008083 | GO:GO:0008150 | GO:GO:0009658 | GO:GO:0009987 | GO:GO:0010469 | GO:GO:0016043 |
| GO:GO:0042127 | RefSeq:NP_200673.1 | ProteinID:OAO95060.1 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020128 | PO:PO:0020137 | PO:PO:0020148 | PO:PO:0025022 | PO:PO:0025181 | PO:PO:0025281 |
| InterPro:PSY | Symbol:PSY1 | PANTHER:PTHR37177 | UniProt:Q941C7 | SignalP:SignalP-noTM | UniParc:UPI00000A75EA |
| SEG:seg | : | : | : | : | : |
Description
PSY1PSY1 [Source:UniProtKB/TrEMBL;Acc:A0A178UNK7]
Coordinates
chr5:-:23699708..23700226
Molecular Weight (calculated)
7928.6 Da
IEP (calculated)
8.530
GRAVY (calculated)
0.116
Length
75 amino acids
Sequence
(BLAST)
(BLAST)
1: MTFVVRLLVC LLLTLTITSS LARNPVSVSG GFENSGFQRS LLMVNVEDYG DPSANPKHDP GVPPSATGQR VVGRG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.