Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 7
- plastid 2
- vacuole 4
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY71288 | Canola | extracellular | 83.1 | 83.1 |
| CDX99061 | Canola | extracellular | 81.69 | 82.86 |
| Bra018161.1-P | Field mustard | extracellular | 81.69 | 81.69 |
| AT5G58650.1 | Thale cress | extracellular | 43.66 | 41.33 |
Protein Annotations
| MapMan:35.2 | EntrezGene:823883 | UniProt:A0A178V6R0 | ProteinID:AEE78262.1 | EMBL:AK117627 | EMBL:AL096860 |
| ArrayExpress:AT3G47295 | EnsemblPlantsGene:AT3G47295 | RefSeq:AT3G47295 | TAIR:AT3G47295 | RefSeq:AT3G47295-TAIR-G | EnsemblPlants:AT3G47295.1 |
| TAIR:AT3G47295.1 | EMBL:AY085556 | Unigene:At.35823 | EMBL:BT004922 | GO:GO:0003674 | GO:GO:0005102 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008083 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0010469 | RefSeq:NP_566890.1 | ProteinID:OAP01566.1 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| InterPro:PSY | PANTHER:PTHR37177 | UniProt:Q8LE92 | SignalP:SignalP-noTM | UniParc:UPI000000C506 | SEG:seg |
Description
PSY2Protein PSY2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LE92]
Coordinates
chr3:+:17427950..17428511
Molecular Weight (calculated)
7694.2 Da
IEP (calculated)
6.508
GRAVY (calculated)
-0.030
Length
71 amino acids
Sequence
(BLAST)
(BLAST)
1: MSFGTRLLLF LILTLPLVTS SSPNTLHVSG IVKTGTTSRF LMMTIEDYDD PSANTRHDPS VPTNAKADTT P
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.