Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 6
- golgi 5
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX99061 | Canola | extracellular | 98.59 | 100.0 |
| AT3G47295.1 | Thale cress | extracellular | 81.69 | 81.69 |
| Bra002629.1-P | Field mustard | extracellular | 56.34 | 54.79 |
Protein Annotations
Description
AT3G47295 (E=1e-019) | unknown protein
Coordinates
chrA06:-:10726637..10726979
Molecular Weight (calculated)
7484.1 Da
IEP (calculated)
10.110
GRAVY (calculated)
0.046
Length
71 amino acids
Sequence
(BLAST)
(BLAST)
1: MSFGVRLLLF LILTLPLVTS SGRNTPSVSG IGKTGVAKRL LMVSIEDYGD PSANTRHDPS VPTNAKADTT P
1: MSFGTRLLLF LILTLPLVTS SSPNTLHVSG IVKTGTTSRF LMMTIEDYDD PSANTRHDPS VPTNAKADTT P
Arabidopsis Description
PSY2Protein PSY2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LE92]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.