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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • golgi 5
  • plasma membrane 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX99061 Canola extracellular 97.18 98.57
AT3G47295.1 Thale cress extracellular 83.1 83.1
CDX80347 Canola extracellular 56.34 54.79
CDY69338 Canola extracellular 56.34 54.79
Protein Annotations
EnsemblPlants:CDY71288EnsemblPlantsGene:GSBRNA2T00013871001InterPro:PSYPANTHER:PTHR37177ProteinID:CDY71288ProteinID:CDY71288.1
SEG:segSignalP:SignalP-noTMUniParc:UPI0004EE661AUniProt:A0A078JUS9MapMan:35.2:
Description
BnaCnng72210DBnaCnng72210D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JUS9]
Coordinates
chrLK045244:+:1717..2369
Molecular Weight (calculated)
7516.2 Da
IEP (calculated)
9.368
GRAVY (calculated)
0.169
Length
71 amino acids
Sequence
(BLAST)
1: MSFGVRLLLF LILTLPLVTS SGRNTLCVSG IGKTGVAKRL LMVSIEDYGD PSANTRHDPS VPTNAKADTT P
Best Arabidopsis Sequence Match ( AT3G47295.1 )
(BLAST)
1: MSFGTRLLLF LILTLPLVTS SSPNTLHVSG IVKTGTTSRF LMMTIEDYDD PSANTRHDPS VPTNAKADTT P
Arabidopsis Description
PSY2Protein PSY2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LE92]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.