Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- endoplasmic reticulum 2
- plastid 1
- extracellular 1
- vacuole 1
- plasma membrane 2
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY07371 | Canola | cytosol, endoplasmic reticulum, plasma membrane, plastid | 74.73 | 89.47 |
| CDY04243 | Canola | cytosol, endoplasmic reticulum, plasma membrane, plastid | 72.53 | 88.0 |
| AT1G68680.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane, plastid | 67.03 | 81.33 |
| Solyc07g005430.2.1 | Tomato | cytosol, golgi, plastid | 49.45 | 62.5 |
| GSMUA_Achr6P04770_001 | Banana | plastid | 51.65 | 61.04 |
| KRH56645 | Soybean | cytosol | 52.75 | 60.0 |
| VIT_11s0016g04770.t01 | Wine grape | cytosol, golgi, plastid | 48.35 | 57.14 |
| TraesCS1B01G136600.1 | Wheat | plastid | 47.25 | 53.09 |
| TraesCS1A01G116600.1 | Wheat | plastid | 43.96 | 50.0 |
| KXG21447 | Sorghum | plastid | 42.86 | 46.99 |
| HORVU1Hr1G026140.3 | Barley | plastid | 45.05 | 46.59 |
| PGSC0003DMT400029039 | Potato | golgi, plasma membrane, plastid | 45.05 | 46.07 |
| Os05t0176600-01 | Rice | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 38.46 | 44.87 |
Protein Annotations
| EnsemblPlants:Bra004023.1 | EnsemblPlants:Bra004023.1-P | EnsemblPlantsGene:Bra004023 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005747 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0016020 |
| GO:GO:0016021 | PANTHER:PTHR37713 | SEG:seg | TMHMM:TMhelix | UniParc:UPI00025419EB | UniProt:M4CII9 |
| MapMan:35.2 | : | : | : | : | : |
Description
AT1G68680 (E=6e-027) | unknown protein
Coordinates
chrA07:-:16372871..16373219
Molecular Weight (calculated)
10141.7 Da
IEP (calculated)
10.543
GRAVY (calculated)
0.476
Length
91 amino acids
Sequence
(BLAST)
(BLAST)
1: MSSSSSDPSK TMMERKKKGA PIKFLVPLIY APALPLIRLT LRHQPVLRDR LFGLVLAGAF VHGFYLVSLA FKTCIAAFVF LSEDLVDKNV F
1: MASSSDPSKP VMERKKKGAP IKFLVPLIYA PALPLIRLSL RHKPVLRDRL FGLVLVGAFA HGFYLVTDIY DAESK
Arabidopsis Description
At1g68680 [Source:UniProtKB/TrEMBL;Acc:Q8L9R6]
SUBAcon: [endoplasmic reticulum,plastid,cytosol,plasma membrane]
SUBAcon: [endoplasmic reticulum,plastid,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.