Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- mitochondrion 1
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g005430.2.1 | Tomato | cytosol, golgi, plastid | 68.54 | 84.72 |
| AT1G68680.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane, plastid | 48.31 | 57.33 |
| CDY04243 | Canola | cytosol, endoplasmic reticulum, plasma membrane, plastid | 48.31 | 57.33 |
| CDY07371 | Canola | cytosol, endoplasmic reticulum, plasma membrane, plastid | 47.19 | 55.26 |
| GSMUA_Achr6P04770_001 | Banana | plastid | 47.19 | 54.55 |
| VIT_11s0016g04770.t01 | Wine grape | cytosol, golgi, plastid | 47.19 | 54.55 |
| KRH56645 | Soybean | cytosol | 46.07 | 51.25 |
| Os05t0176600-01 | Rice | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 42.7 | 48.72 |
| TraesCS1B01G136600.1 | Wheat | plastid | 42.7 | 46.91 |
| TraesCS1A01G116600.1 | Wheat | plastid | 41.57 | 46.25 |
| KXG21447 | Sorghum | plastid | 42.7 | 45.78 |
| Bra004023.1-P | Field mustard | cytosol, endoplasmic reticulum, plasma membrane | 46.07 | 45.05 |
| HORVU1Hr1G026140.3 | Barley | plastid | 43.82 | 44.32 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400029039 | EnsemblPlantsGene:PGSC0003DMG401011174 | EntrezGene:102592195 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005747 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0016020 |
| GO:GO:0016021 | PANTHER:PTHR37713 | PGSC:PGSC0003DMG401011174 | TMHMM:TMhelix | UniParc:UPI000296EF7E | UniProt:M1AS48 |
| MapMan:35.2 | : | : | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG401011174]
Coordinates
chr7:-:632322..633200
Molecular Weight (calculated)
10166.5 Da
IEP (calculated)
9.611
GRAVY (calculated)
0.371
Length
89 amino acids
Sequence
(BLAST)
(BLAST)
1: MDSSSDSQVI RRRKGPAFEY LVPLIYAPAL PLNEYAIYLL YLIAFDVFGF SVRIALRHKP VLRDRLFYGV LAGAFAHGTY LVYPLSHPF
1: MASSSDPSKP VMERKKKGAP IKFLVPLIYA PALPLIRLSL RHKPVLRDRL FGLVLVGAFA HGFYLVTDIY DAESK
Arabidopsis Description
At1g68680 [Source:UniProtKB/TrEMBL;Acc:Q8L9R6]
SUBAcon: [endoplasmic reticulum,plastid,cytosol,plasma membrane]
SUBAcon: [endoplasmic reticulum,plastid,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.