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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY61114 Canola nucleus 60.18 94.37
Bra020530.1-P Field mustard nucleus 21.26 61.74
AT5G26720.1 Thale cress nucleus 20.36 50.75
Protein Annotations
EnsemblPlants:Bra009906.1EnsemblPlants:Bra009906.1-PEnsemblPlantsGene:Bra009906Gene3D:1.20.1050.130Gene3D:3.30.70.100GO:GO:0003674
GO:GO:0005488GO:GO:0006810GO:GO:0008150GO:GO:0030001GO:GO:0046872InterPro:HMA_dom
InterPro:HMA_dom_sfInterPro:IPR006121PANTHER:PTHR35123PANTHER:PTHR35123:SF2PFAM:PF00403SEG:seg
SUPFAM:SSF55008UniParc:UPI000253F424UniProt:M4D0A8MapMan:35.1::
Description
AT3G05920 (E=1e-024) | heavy-metal-associated domain-containing protein
Coordinates
chrA06:+:17989181..17996051
Molecular Weight (calculated)
37182.4 Da
IEP (calculated)
7.826
GRAVY (calculated)
-0.537
Length
334 amino acids
Sequence
(BLAST)
001: MPGSRGEITV GEHNGVDNDH NRKKEDGIES ENQLVMPSIS KPRKRFIDKF RKRPKSPKRS SSRSGSRKGG CFSLRRRRRR TEEGEEEEDS STVSDPNDEC
101: FTHEMMRVML ETNDFCSNEC NPHRRKLSGT SVLLRYVGRS ATSLPGFYGS DAFESSQIDE WVDYATVFSS GSEFENACTR VDTTLRVVLT FSLAILCPLQ
201: TLLSGQLLLK VEMKVDINCG KCKNAIMQAV AEIEGVNQVV LDEEKSLLTV VGTMDPICVA EKLRKIKQKP VVVNIGPPKP PEAKTEPKPV CCKPCPPYCP
301: PTYCPPPYCP PYYSNNCDMV TVSTYSNGSG CTIV
Best Arabidopsis Sequence Match ( AT3G05920.1 )
(BLAST)
001: MTVKKVEIKV DINCGKCNSA IMEAVTEIEG VNHISLDEGN SILTVVGTMD PVCVATRLKK IKQKPVIISV GPPPKPPEPP KPPEPEKPKP PPAPEPPKHV
101: CKPPYCNSCD VVSVTTYESG SGCTIL
Arabidopsis Description
HIPP43Heavy metal-associated isoprenylated plant protein 43 [Source:UniProtKB/Swiss-Prot;Acc:Q9SFF7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.