Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- plastid 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY61114 | Canola | nucleus | 60.18 | 94.37 |
Bra020530.1-P | Field mustard | nucleus | 21.26 | 61.74 |
AT5G26720.1 | Thale cress | nucleus | 20.36 | 50.75 |
Protein Annotations
EnsemblPlants:Bra009906.1 | EnsemblPlants:Bra009906.1-P | EnsemblPlantsGene:Bra009906 | Gene3D:1.20.1050.130 | Gene3D:3.30.70.100 | GO:GO:0003674 |
GO:GO:0005488 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0030001 | GO:GO:0046872 | InterPro:HMA_dom |
InterPro:HMA_dom_sf | InterPro:IPR006121 | PANTHER:PTHR35123 | PANTHER:PTHR35123:SF2 | PFAM:PF00403 | SEG:seg |
SUPFAM:SSF55008 | UniParc:UPI000253F424 | UniProt:M4D0A8 | MapMan:35.1 | : | : |
Description
AT3G05920 (E=1e-024) | heavy-metal-associated domain-containing protein
Coordinates
chrA06:+:17989181..17996051
Molecular Weight (calculated)
37182.4 Da
IEP (calculated)
7.826
GRAVY (calculated)
-0.537
Length
334 amino acids
Sequence
(BLAST)
(BLAST)
001: MPGSRGEITV GEHNGVDNDH NRKKEDGIES ENQLVMPSIS KPRKRFIDKF RKRPKSPKRS SSRSGSRKGG CFSLRRRRRR TEEGEEEEDS STVSDPNDEC
101: FTHEMMRVML ETNDFCSNEC NPHRRKLSGT SVLLRYVGRS ATSLPGFYGS DAFESSQIDE WVDYATVFSS GSEFENACTR VDTTLRVVLT FSLAILCPLQ
201: TLLSGQLLLK VEMKVDINCG KCKNAIMQAV AEIEGVNQVV LDEEKSLLTV VGTMDPICVA EKLRKIKQKP VVVNIGPPKP PEAKTEPKPV CCKPCPPYCP
301: PTYCPPPYCP PYYSNNCDMV TVSTYSNGSG CTIV
101: FTHEMMRVML ETNDFCSNEC NPHRRKLSGT SVLLRYVGRS ATSLPGFYGS DAFESSQIDE WVDYATVFSS GSEFENACTR VDTTLRVVLT FSLAILCPLQ
201: TLLSGQLLLK VEMKVDINCG KCKNAIMQAV AEIEGVNQVV LDEEKSLLTV VGTMDPICVA EKLRKIKQKP VVVNIGPPKP PEAKTEPKPV CCKPCPPYCP
301: PTYCPPPYCP PYYSNNCDMV TVSTYSNGSG CTIV
001: MTVKKVEIKV DINCGKCNSA IMEAVTEIEG VNHISLDEGN SILTVVGTMD PVCVATRLKK IKQKPVIISV GPPPKPPEPP KPPEPEKPKP PPAPEPPKHV
101: CKPPYCNSCD VVSVTTYESG SGCTIL
101: CKPPYCNSCD VVSVTTYESG SGCTIL
Arabidopsis Description
HIPP43Heavy metal-associated isoprenylated plant protein 43 [Source:UniProtKB/Swiss-Prot;Acc:Q9SFF7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.