Factsheet for Bra030704.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra000481.1-P	Field mustard	nucleus	97.09	97.09
VIT_13s0019g00780.t01	Wine grape	nucleus	97.09	97.09
TraesCSU01G175900.1	Wheat	nucleus	97.09	97.09
TraesCS6D01G241500.1	Wheat	nucleus	97.09	97.09
TraesCS6D01G062900.1	Wheat	nucleus	97.09	97.09
TraesCS5B01G215500.1	Wheat	nucleus	97.09	97.09
TraesCS3B01G167600.1	Wheat	nucleus	97.09	97.09
TraesCS1D01G366500.1	Wheat	nucleus	97.09	97.09
Solyc11g066160.1.1	Tomato	nucleus	97.09	97.09
Os02t0684500-00	Rice	nucleus	97.09	97.09
GSMUA_Achr10P...	Banana	nucleus	97.09	97.09
EES00251	Sorghum	nucleus	97.09	97.09
CDY31726	Canola	nucleus	97.09	97.09
CDY18434	Canola	nucleus	97.09	97.09
Bra035673.1-P	Field mustard	nucleus	97.09	97.09
Bra031594.1-P	Field mustard	nucleus	97.09	97.09
Bra005185.1-P	Field mustard	nucleus	97.09	97.09
Bra006699.1-P	Field mustard	nucleus	97.09	97.09
Bra007023.1-P	Field mustard	nucleus	97.09	97.09
Bra017178.1-P	Field mustard	nucleus	97.09	97.09
Bra018691.1-P	Field mustard	nucleus	97.09	97.09
Bra038268.1-P	Field mustard	nucleus	96.12	96.12
Bra011929.1-P	Field mustard	nucleus	96.12	96.12
Bra020297.1-P	Field mustard	nucleus	96.12	96.12
Bra000006.1-P	Field mustard	nucleus	95.15	95.15
Bra018682.1-P	Field mustard	nucleus	94.17	94.17
TraesCS7A01G408100.1	Wheat	nucleus	78.64	78.64
Zm00001d021422_P001	Maize	plastid	96.12	72.26
HORVU4Hr1G063260.2	Barley	nucleus	96.12	71.22
HORVU3Hr1G023460.1	Barley	nucleus	96.12	70.71
HORVU2Hr1G097990.1	Barley	nucleus, plastid	96.12	65.13
HORVU4Hr1G023200.1	Barley	nucleus	96.12	60.37
HORVU5Hr1G086620.4	Barley	nucleus	96.12	54.1

Protein Annotations

Gene3D:1.10.20.10	MapMan:12.1.5	EnsemblPlantsGene:Bra030704	EnsemblPlants:Bra030704.1	EnsemblPlants:Bra030704.1-P	InterPro:CENP-T/H4_C
GO:GO:0000786	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005694	GO:GO:0006334
GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	GO:GO:0046982	InterPro:Histone-fold	InterPro:Histone_H4
InterPro:Histone_H4_CS	InterPro:IPR009072	UniProt:M4EPI4	PFAM:PF15511	PRINTS:PR00623	ScanProsite:PS00047
PANTHER:PTHR10484	PANTHER:PTHR10484:SF160	SMART:SM00417	SUPFAM:SSF47113	UniParc:UPI0002546D57	SEG:seg

Description

AT5G59690 (E=4e-039) | histone H4

Coordinates

chrA08:+:20730725..20731036

Molecular Weight (calculated)

11483.2 Da

IEP (calculated)

11.731

GRAVY (calculated)

-0.466

Length

103 amino acids

Sequence
(BLAST)

001: MSGRGKGGKG LGKGGAKRHR KVLRDNIQGI TEPWIRRLAR RGGVKLISGL IYEETRGVLK IFLENVIRDA VTYTEHARRK TVTAMDVVYA LKRQGRTLYG
101: FGG

Best Arabidopsis Sequence Match ( AT1G07660.1 )
(BLAST)

001: MSGRGKGGKG LGKGGAKRHR KVLRDNIQGI TKPAIRRLAR RGGVKRISGL IYEETRGVLK IFLENVIRDA VTYTEHARRK TVTAMDVVYA LKRQGRTLYG
101: FGG

Arabidopsis Description

Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.