Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 1
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016295.1-P | Field mustard | cytosol | 37.68 | 43.33 |
| Bra003991.1-P | Field mustard | cytosol, mitochondrion, plastid | 36.96 | 42.5 |
| Bra007871.1-P | Field mustard | cytosol, mitochondrion, plastid | 36.96 | 42.5 |
| Bra039041.1-P | Field mustard | cytosol, mitochondrion, plastid | 36.23 | 41.67 |
| Bra004400.1-P | Field mustard | cytosol, mitochondrion, plastid | 36.96 | 21.07 |
Protein Annotations
| MapMan:17.1.2.1.34 | Gene3D:3.40.1800.40 | EnsemblPlantsGene:Bra033066 | EnsemblPlants:Bra033066.1 | EnsemblPlants:Bra033066.1-P | GO:GO:0003674 |
| GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0019538 | InterPro:IPR038562 | UniProt:M4EW82 | PFAM:PF01199 | PANTHER:PTHR10759 | PANTHER:PTHR10759:SF18 |
| InterPro:Ribosomal_L34Ae | InterPro:Ribosomal_L34Ae_sf | UniParc:UPI000254701E | : | : | : |
Description
AT3G28900 (E=2e-019) | 60S ribosomal protein L34 (RPL34C)
Coordinates
chrA02:+:21561297..21568836
Molecular Weight (calculated)
16120.7 Da
IEP (calculated)
10.434
GRAVY (calculated)
-0.569
Length
138 amino acids
Sequence
(BLAST)
(BLAST)
001: MEIEQGKELL LEPKTVTEKS YFCTHSIATV AVPKAFTRRR EAKDMHMYAD LTNHLSILFE DGVITMSTNK ATKEKKADVH KEYWKIPHLR PTEYIRSRLS
101: RNQRTVKHAY GGALSRVACR QRIVRAFLVE EQKIVKKF
101: RNQRTVKHAY GGALSRVACR QRIVRAFLVE EQKIVKKF
001: MSMKSLERVV SERALKLGNS FPCQICVVGF LCGICLTSLF LAALTSLGTF EFAAFSFTSS SSVFPPCNSS TSHIINMVAS IDRKLKWKNK VEIEEEDEVK
101: LLVSAWDNLL LNEEDFLKKV GINKSDVPNG PHLENCEEKA RVRERLDTRL ANWTLPPWIS GGDEENYPLT RRVQRDIWIH QHPLDCGNKS LKFLVADWET
201: LPGFGIGAQI AGMTGLLAIA INENRVLVAN YYNRADHDGC KGSFRGNWSC YFLQETSEEC RKRAFAIVKK REAWESGIVT GKQNYSTKEI WAGAIPKQWG
301: KPWSYMKPTT EINGSLISNH RKMDRRWWRA QAVRYLMRYQ TEYTCGLMNI ARNSAFGKEA AKIVLSAGDW RKKNKKMRTE IEEQVWSDHK PWLPRPMLSV
401: HVRMGDKACE MRVAALEEYM HLADRIRDRF PELNRIWLST EMKEVVDRSK DYAHWRFYYT EVARQVGNKS MAEYEASLGR EMSTNYPLVN FLMASEADFF
501: VGALGSTWCF LIDGMRNTGG KVMSGYLSVN KDRFW
101: LLVSAWDNLL LNEEDFLKKV GINKSDVPNG PHLENCEEKA RVRERLDTRL ANWTLPPWIS GGDEENYPLT RRVQRDIWIH QHPLDCGNKS LKFLVADWET
201: LPGFGIGAQI AGMTGLLAIA INENRVLVAN YYNRADHDGC KGSFRGNWSC YFLQETSEEC RKRAFAIVKK REAWESGIVT GKQNYSTKEI WAGAIPKQWG
301: KPWSYMKPTT EINGSLISNH RKMDRRWWRA QAVRYLMRYQ TEYTCGLMNI ARNSAFGKEA AKIVLSAGDW RKKNKKMRTE IEEQVWSDHK PWLPRPMLSV
401: HVRMGDKACE MRVAALEEYM HLADRIRDRF PELNRIWLST EMKEVVDRSK DYAHWRFYYT EVARQVGNKS MAEYEASLGR EMSTNYPLVN FLMASEADFF
501: VGALGSTWCF LIDGMRNTGG KVMSGYLSVN KDRFW
Arabidopsis Description
Alpha-(1,6)-fucosyltransferase [Source:UniProtKB/TrEMBL;Acc:Q6ICX5]
SUBAcon: [endoplasmic reticulum,golgi,cytosol]
SUBAcon: [endoplasmic reticulum,golgi,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.