Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G21840.1 | Thale cress | nucleus | 48.32 | 48.63 |
| AT2G21850.1 | Thale cress | cytosol | 46.77 | 46.0 |
Protein Annotations
| Gene3D:3.30.40.10 | MapMan:35.2 | EnsemblPlantsGene:Bra033990 | EnsemblPlants:Bra033990.1 | EnsemblPlants:Bra033990.1-P | ncoils:Coil |
| InterPro:DC1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0035556 | GO:GO:0046872 |
| InterPro:IPR002219 | InterPro:IPR013083 | UniProt:M4EYU8 | InterPro:PE/DAG-bd | PFAM:PF03107 | ScanProsite:PS01359 |
| SMART:SM00109 | SUPFAM:SSF57889 | UniParc:UPI0002545F1E | InterPro:Zinc_finger_PHD-type_CS | InterPro:Znf_RING/FYVE/PHD | SEG:seg |
Description
AT2G21840 (E=1e-223) | protein binding / zinc ion binding
Coordinates
chrA02:-:10393023..10395668
Molecular Weight (calculated)
88881.7 Da
IEP (calculated)
6.973
GRAVY (calculated)
-0.306
Length
774 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKLKHGAHE CLLTSPEIID NGICNICFKD EPIEFACDLC NFDLCRACSK LPLKVSHDFH PDHPLEFCLG KKDGNERYKL CSGCGDLFSD QSLYYKCKDC
101: EIFLDLGCAI LNNTKTSWYA EEKLHYSHAH FLRRCKPGPD ARGSCLMCEL PLTPSAVSYG CSQCYLFAHE RCLDLPREIQ HPVHQAHPLT RLDFTHTCGG
201: GKVCDACGLH VEGAPLSCLE CSFYLHLRCA DSLLRGLVHK SHQHKLFYLA NNAKLRFKNG CRVCMRDDDG SYGDYLYHCV ECGWRSHFKC LEIPESVVNK
301: SYHIHPLVCK IFLSEDDSLE YCDVCETMVH AGHHAYCCEE CGFLSHIECI LHEEMPSPLY LKDLYSHLGE KLTRPADHDD KCETKELENK LVVIDVTHNH
401: VLRSRYVTAS QKGCWICYRY IHGRLWKCET CRFEAHDNCI KLSQQSRYRF HLNHPLTLLP SYPAGATNMR CDTCKEKIDY FNLFCRICDF IICTKCAVSV
501: KMRLGELQRG QKFIRYEEGK FCLKGGHDLV QVMVSRSYMV ACTLCDDRLC NGNIVSCPDC EEIYHSQCIE LWRRYRALEN HPLHYNHILY MIKRKTGSKC
601: TACKPDIDIS KYVFFCSTCS LSFHFKCIQA VGISTRIKTH KHCLYNFLSD DSSRPCTICN KPCGASFYAC DICNVCAHEE CIGFPTYVKN QRHQHIVNLK
701: KIYAPKICSI CGLDTKFSGH KYQYTCDDCK DVFHTNCIMS MVEREAATEE EQISDLSNML KDMDESDEED SDSS
101: EIFLDLGCAI LNNTKTSWYA EEKLHYSHAH FLRRCKPGPD ARGSCLMCEL PLTPSAVSYG CSQCYLFAHE RCLDLPREIQ HPVHQAHPLT RLDFTHTCGG
201: GKVCDACGLH VEGAPLSCLE CSFYLHLRCA DSLLRGLVHK SHQHKLFYLA NNAKLRFKNG CRVCMRDDDG SYGDYLYHCV ECGWRSHFKC LEIPESVVNK
301: SYHIHPLVCK IFLSEDDSLE YCDVCETMVH AGHHAYCCEE CGFLSHIECI LHEEMPSPLY LKDLYSHLGE KLTRPADHDD KCETKELENK LVVIDVTHNH
401: VLRSRYVTAS QKGCWICYRY IHGRLWKCET CRFEAHDNCI KLSQQSRYRF HLNHPLTLLP SYPAGATNMR CDTCKEKIDY FNLFCRICDF IICTKCAVSV
501: KMRLGELQRG QKFIRYEEGK FCLKGGHDLV QVMVSRSYMV ACTLCDDRLC NGNIVSCPDC EEIYHSQCIE LWRRYRALEN HPLHYNHILY MIKRKTGSKC
601: TACKPDIDIS KYVFFCSTCS LSFHFKCIQA VGISTRIKTH KHCLYNFLSD DSSRPCTICN KPCGASFYAC DICNVCAHEE CIGFPTYVKN QRHQHIVNLK
701: KIYAPKICSI CGLDTKFSGH KYQYTCDDCK DVFHTNCIMS MVEREAATEE EQISDLSNML KDMDESDEED SDSS
001: MGKLQHGSHE CELTSRGIVA NGICNICFKD EPVEFACDPC NFDLCKACSD LPQKMSHHLH PEHPLEFRIG EDDQKTKHMV CVVCGNMSSG AKYYYECSKC
101: EIYLDLGCAL QKNIATSWEA KEMLHYSHEH LLKRCRPGPD SKDSCLLCEQ PLSFTAICYG CVHCYLFFHE RCLDLPTEIQ HPVHPMHPLK RLNYIQTFDG
201: EKSCNACHGQ FVGVPFGCLG CGFYLHLRCA DALLRGLLYK SHEHRLFYVE STRRVADERV KQPCLICKET VVYDRFYYLC VECDLKCHTK CLEIPEYVIK
301: KSYHIHKLRF IRVGGEDDFL EYCGVCETMV ISRYPEYSCE ECDFVGHTEC ILREEVPSPM YLKDLYSCSK GNTKSQHLET IEFEDRLLVN SFSHIHVMKL
401: IHMSELEEEG KCNMCGTKIH DNPCKCETCS FQSHDFCAEL GRPSKHQFHL NHSLTLLPNT PRWFRRKCES CKDDIGGFNL FCRICNFIID INCALKDKKM
501: HGALQRGQKI IGTWLGLCIQ DKHSLFQVIV SRSYPITCSI CDEKFCGKAF SCVTCEDIYH PMCIQVGRRI LVGHPLHVDH MLAISLKSGS KCTACQLNIT
601: KYGYHCTICE INFHIECIKA VIVPRKIKSH SHYFYNFWNN DSRVTRACGV CSRPCGVSFY GCIDCMFNAH VECIGFPANV RNQRHVHTLT QVYTSHREKW
701: SVRDNYMDRI SYKCYPCDRN FPTERIMSKD DRRETTEEKQ QKDIYLMHLE RDLIDLLVRT DDDACGQSQ
101: EIYLDLGCAL QKNIATSWEA KEMLHYSHEH LLKRCRPGPD SKDSCLLCEQ PLSFTAICYG CVHCYLFFHE RCLDLPTEIQ HPVHPMHPLK RLNYIQTFDG
201: EKSCNACHGQ FVGVPFGCLG CGFYLHLRCA DALLRGLLYK SHEHRLFYVE STRRVADERV KQPCLICKET VVYDRFYYLC VECDLKCHTK CLEIPEYVIK
301: KSYHIHKLRF IRVGGEDDFL EYCGVCETMV ISRYPEYSCE ECDFVGHTEC ILREEVPSPM YLKDLYSCSK GNTKSQHLET IEFEDRLLVN SFSHIHVMKL
401: IHMSELEEEG KCNMCGTKIH DNPCKCETCS FQSHDFCAEL GRPSKHQFHL NHSLTLLPNT PRWFRRKCES CKDDIGGFNL FCRICNFIID INCALKDKKM
501: HGALQRGQKI IGTWLGLCIQ DKHSLFQVIV SRSYPITCSI CDEKFCGKAF SCVTCEDIYH PMCIQVGRRI LVGHPLHVDH MLAISLKSGS KCTACQLNIT
601: KYGYHCTICE INFHIECIKA VIVPRKIKSH SHYFYNFWNN DSRVTRACGV CSRPCGVSFY GCIDCMFNAH VECIGFPANV RNQRHVHTLT QVYTSHREKW
701: SVRDNYMDRI SYKCYPCDRN FPTERIMSKD DRRETTEEKQ QKDIYLMHLE RDLIDLLVRT DDDACGQSQ
Arabidopsis Description
Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:Q0WPH4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.