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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • golgi 5
  • plasma membrane 6
  • endoplasmic reticulum 5
  • vacuole 5
  • plastid 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:nucleus, secretory
BaCelLo:secretory
ChloroP:plastid
EpiLoc:plasma membrane
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:nucleus
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra000670.1-P Field mustard endoplasmic reticulum, vacuole 80.25 51.59
AT4G09030.1 Thale cress extracellular, plastid 67.9 43.31
Protein Annotations
EnsemblPlants:Bra038390.1EnsemblPlants:Bra038390.1-PEnsemblPlantsGene:Bra038390PANTHER:PTHR36321SEG:segSignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI0002542333UniProt:M4FBC4MapMan:21.4.1.1.1::
Description
arabinogalactan protein 5 [Source:TAIR;Acc:AT1G35230](projected from arabidopsis_thaliana,AT1G35230)
Coordinates
chrA09:+:11003033..11003278
Molecular Weight (calculated)
8119.8 Da
IEP (calculated)
12.053
GRAVY (calculated)
0.233
Length
81 amino acids
Sequence
(BLAST)
1: MASKSIVVFL LLALIASSVI AQAPGPSPTR SPLPATPPIS QPPRTAAPTP SRVTPTAAPT SPPVGSPTST FASLFVRDSA D
Best Arabidopsis Sequence Match ( AT4G09030.1 )
(BLAST)
001: MASKSVVVLL FLALIASSAI AQAPGPAPTR SPLPSPAQPP RTAAPTPSIT PTPTPTPSAT PTAAPVSPPA GSPLPSSASP PAPPTSLTPD GAPVAGPTGS
101: TPVDNNNAAT LAAGSLAGFV FVASLLL
Arabidopsis Description
AGP10Classical arabinogalactan protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0S4]
SUBAcon: [extracellular,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.