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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX96465 Canola extracellular 70.33 78.05
CDX72973 Canola extracellular 84.07 71.5
CDX82085 Canola extracellular 17.58 58.18
CDX82080 Canola extracellular 25.27 56.79
CDX96461 Canola extracellular 63.19 55.02
CDX96462 Canola extracellular 62.09 54.07
CDY30911 Canola extracellular, vacuole 58.24 53.81
CDY68006 Canola extracellular, plasma membrane, vacuole 60.44 53.66
CDX72971 Canola extracellular 62.09 53.55
CDY45152 Canola extracellular, vacuole 57.69 53.3
CDX72972 Canola extracellular 58.79 52.2
CDX96464 Canola extracellular 60.44 51.89
CDX82093 Canola extracellular 38.46 51.85
CDX82086 Canola extracellular 20.33 51.39
CDX96463 Canola extracellular, vacuole 48.35 51.16
CDY69418 Canola extracellular 56.59 50.24
CDY65087 Canola cytosol, extracellular, mitochondrion 38.46 50.0
CDY59714 Canola extracellular, nucleus, vacuole 62.64 49.14
CDX68235 Canola extracellular 53.85 48.51
CDY65093 Canola extracellular 51.1 48.44
CDY11118 Canola extracellular 52.75 47.76
CDY67710 Canola extracellular 35.16 47.41
CDY65089 Canola extracellular 53.85 47.34
CDY65088 Canola extracellular 43.41 47.31
CDX72969 Canola extracellular 52.2 47.03
AT1G73260.1 Thale cress extracellular, vacuole 55.49 46.98
CDY65090 Canola extracellular 45.6 46.89
CDX96460 Canola extracellular 51.65 46.53
CDY11117 Canola extracellular 51.65 46.53
CDY33655 Canola extracellular 24.73 45.45
CDY68690 Canola extracellular 53.3 42.73
CDY59712 Canola extracellular 26.37 38.4
CDY59713 Canola cytosol, nucleus, vacuole 38.46 35.53
CDY53302 Canola cytosol 3.3 12.0
CDY46062 Canola cytosol 3.3 12.0
CDY39492 Canola cytosol 3.3 12.0
CDX72637 Canola cytosol 3.3 12.0
Protein Annotations
Gene3D:2.80.10.50MapMan:35.1GO:A0A078C7Y4EnsemblPlants:CDX72977ProteinID:CDX72977ProteinID:CDX72977.1
GO:GO:0003674GO:GO:0004866GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0019538
GO:GO:0030234EnsemblPlantsGene:GSBRNA2T00103407001MEROPS:I03.030InterPro:Kunitz_inhibitor_STI-like_sfPFAM:PF00197PRINTS:PR00291
ScanProsite:PS00283PANTHER:PTHR33107InterPro:Prot_inh_Kunz-lgSMART:SM00452SUPFAM:SSF50386SignalP:SignalP-noTM
UniParc:UPI0004EF3F8ASEG:seg::::
Description
BnaC06g34250D
Coordinates
chrLK031797:-:1447656..1450151
Molecular Weight (calculated)
19698.6 Da
IEP (calculated)
8.471
GRAVY (calculated)
-0.050
Length
182 amino acids
Sequence
(BLAST)
001: MNPMFYFLLA LTAVLAATAN AGPVVDIDGD IIFHGSYYVI PVIRGPEGGG LTLTTRNGNQ CPLFIGQERS EVERGIPVKF SNWRSRVGPW RSAFIAVGPK
101: PEAGGEDSSR SFFQIKKTEA KLNAYKFVFC RDGNDCIDVG KNEEGGVRGL VLGSRPPFAT PFEVVFVKAT GSETSSKTMS II
Best Arabidopsis Sequence Match ( AT1G73260.1 )
(BLAST)
001: MTKTTKTMNP KFYLVLALTA VLASNAYGAV VDIDGNAMFH ESYYVLPVIR GRGGGLTLAG RGGQPCPYDI VQESSEVDEG IPVKFSNWRL KVAFVPESQN
101: LNIETDVGAT ICIQSTYWRV GEFDHERKQY FVVAGPKPEG FGQDSLKSFF KIEKSGEDAY KFVFCPRTCD SGNPKCSDVG IFIDELGVRR LALSDKPFLV
201: MFKKANVTEV SSKTM
Arabidopsis Description
KTI1Kunitz trypsin inhibitor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXD5]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.