CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, nucleus, cytosol

Predictor Summary:

plastid 1
mitochondrion 2
vacuole 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82093	Canola	extracellular	26.9	39.26
CDX72977	Canola	extracellular	35.53	38.46
CDY59714	Canola	extracellular, nucleus, vacuole	44.16	37.5
CDX72972	Canola	extracellular	38.58	37.07
CDY65093	Canola	extracellular	36.04	36.98
CDX96462	Canola	extracellular	38.58	36.36
CDX72971	Canola	extracellular	38.58	36.02
CDX72973	Canola	extracellular	39.09	35.98
CDY11118	Canola	extracellular	36.55	35.82
CDX68235	Canola	extracellular	36.55	35.64
CDX96461	Canola	extracellular	37.56	35.41
CDY65089	Canola	extracellular	37.06	35.27
CDX82080	Canola	extracellular	14.21	34.57
CDY11117	Canola	extracellular	35.03	34.16
CDX96463	Canola	extracellular, vacuole	29.44	33.72
CDX96460	Canola	extracellular	34.52	33.66
CDX72969	Canola	extracellular	34.01	33.17
CDX96465	Canola	extracellular	27.41	32.93
CDY65087	Canola	cytosol, extracellular, mitochondrion	23.35	32.86
AT1G73260.1	Thale cress	extracellular, vacuole	35.53	32.56
CDY69418	Canola	extracellular	33.5	32.2
CDY65090	Canola	extracellular	28.43	31.64
CDX96464	Canola	extracellular	34.01	31.6
CDY45152	Canola	extracellular, vacuole	31.47	31.47
CDY68006	Canola	extracellular, plasma membrane, vacuole	32.49	31.22
CDY65088	Canola	extracellular	26.4	31.14
CDY30911	Canola	extracellular, vacuole	30.96	30.96
CDX82085	Canola	extracellular	8.63	30.91
CDY67710	Canola	extracellular	19.8	28.89
CDY33655	Canola	extracellular	14.21	28.28
CDX82086	Canola	extracellular	9.64	26.39
CDY68690	Canola	extracellular	27.41	23.79
CDY59712	Canola	extracellular	13.2	20.8
CDY39492	Canola	cytosol	5.08	20.0
CDY46062	Canola	cytosol	5.08	20.0
CDY53302	Canola	cytosol	5.08	20.0
CDX72637	Canola	cytosol	5.08	20.0

Protein Annotations

Gene3D:2.80.10.50	MapMan:35.2	GO:A0A078J8I5	UniProt:A0A078J8I5	EnsemblPlants:CDY59713	ProteinID:CDY59713
ProteinID:CDY59713.1	GO:GO:0003674	GO:GO:0004866	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0010951	GO:GO:0019538	GO:GO:0030234	EnsemblPlantsGene:GSBRNA2T00027620001	InterPro:Kunitz_inhibitor_STI-like_sf	PFAM:PF00197
PANTHER:PTHR33107	InterPro:Prot_inh_Kunz-lg	SMART:SM00452	SUPFAM:SSF50386	UniParc:UPI0004EE6C2B	SEG:seg

Description

BnaC02g46460DBnaC02g46460D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J8I5]

Coordinates

chrLK033798:-:14029..15627

Molecular Weight (calculated)

22235.7 Da

IEP (calculated)

9.554

GRAVY (calculated)

-0.249

Length

197 amino acids

Sequence
(BLAST)

001: MINNIQKLTR THKLTFSSSY NIKSNQLHKL KKGESHVLHL ALTVVLAATA QVDGNIIFDD SYYVLPIYSN GGGLTLPSRG HDTNVPSMLD MNIRREPQHR
101: DGRQSYDLRS VNLLTFVTAG RNPEAGEDFS RSFFQIHKPI GLFASYQIMF CPNNNDCRNI GVVVEEYGVP RLALSPMTFS FYFRKATEIS SKTMSII

Best Arabidopsis Sequence Match ( AT1G73260.1 )
(BLAST)

001: MTKTTKTMNP KFYLVLALTA VLASNAYGAV VDIDGNAMFH ESYYVLPVIR GRGGGLTLAG RGGQPCPYDI VQESSEVDEG IPVKFSNWRL KVAFVPESQN
101: LNIETDVGAT ICIQSTYWRV GEFDHERKQY FVVAGPKPEG FGQDSLKSFF KIEKSGEDAY KFVFCPRTCD SGNPKCSDVG IFIDELGVRR LALSDKPFLV
201: MFKKANVTEV SSKTM

Arabidopsis Description

KTI1Kunitz trypsin inhibitor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXD5]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.