Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 1
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Protein Annotations
| EnsemblPlants:CDX80144 | EnsemblPlantsGene:GSBRNA2T00133052001 | InterPro:DUF974 | PANTHER:PTHR13134 | PANTHER:PTHR13134:SF3 | PFAM:PF06159 |
| ProteinID:CDX80144 | ProteinID:CDX80144.1 | SEG:seg | UniParc:UPI0004EF4C2D | MapMan:22.6.6.2.4 | : |
Description
BnaA05g00120D
Coordinates
chrLK031819:+:2076471..2079122
Molecular Weight (calculated)
48676.3 Da
IEP (calculated)
6.744
GRAVY (calculated)
-0.215
Length
439 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTGATQGPH SLAFRVMRLC KPSFHVDPPL RIDPFDLLAG EDFSDDPASA SLLRRHLSSA EGVDSDLSYR NRFLISHPTD PIGLSGLLLL PQSFGAIYLG
101: ETFCSYISVN NSSTSQVRDV TIKAEIQTER QRILLLDTSK SPVESIRTGG RYDFIVEHDV KELGAHTLVC SALYNDADGE RKYLPQFFKF VVANPLSVRT
201: KVRVVKETTF LEACIENHTK ANLFMDQVDF EPAKQWTALR LHDPSSQHPP SSVLGGIIPN PPVIIRSGGG IHNYLYKLVP SADVSGQTKL QGSSILGKFQ
301: ITWRTNLGEP GRLQTQQILG APVSRKEINM RVVEVPTAIH LNRPFSASLN LTNQTDRQLG PFEVSLLQDE SQMEKPVAIN GLQKLMLPRL EAFGSSDFQL
401: NLIASKLGVQ KIGGITTFDT REKKTYELVP EMEIFVESD
101: ETFCSYISVN NSSTSQVRDV TIKAEIQTER QRILLLDTSK SPVESIRTGG RYDFIVEHDV KELGAHTLVC SALYNDADGE RKYLPQFFKF VVANPLSVRT
201: KVRVVKETTF LEACIENHTK ANLFMDQVDF EPAKQWTALR LHDPSSQHPP SSVLGGIIPN PPVIIRSGGG IHNYLYKLVP SADVSGQTKL QGSSILGKFQ
301: ITWRTNLGEP GRLQTQQILG APVSRKEINM RVVEVPTAIH LNRPFSASLN LTNQTDRQLG PFEVSLLQDE SQMEKPVAIN GLQKLMLPRL EAFGSSDFQL
401: NLIASKLGVQ KIGGITTFDT REKKTYELVP EMEIFVESD
001: MSATQTQTHG PHSLAFRVMR LCKPSFHVDP PLRIDPFDLL AGEDFSDDPS SASLFRRHVS SADAVDSDLS YRNRFLLNHP TDPIGLSGLL LLPQSFGAIY
101: LGETFCSYIS VNNSSTSEVR DVTIKAEIQT ERQRILLLDT SKSPVESIRT GGRYDFIVEH DVKELGAHTL VCSALYNDAD GERKYLPQFF KFVVANPLSV
201: RTKVRVVKET TFLEACIENH TKANLFMDQV DFEPAKQWSA VRLQNEDSTE DPPTSGLSGL IPKPPVIIRS GGGIHNYLYK LNPSADVSGQ TKFQGSNILG
301: KFQITWRTNL GEPGRLQTQQ ILGAPVSRKE INMRVVEVPA VIHLNRPFRA YLNLTNQTDR QLGPFEVSLS QDETQLEKPV GINGLQTLML PRIEAFGSND
401: FQLNLIASKL GVQKIAGITA LDTREKKTYE LVPDMEIFVE TD
101: LGETFCSYIS VNNSSTSEVR DVTIKAEIQT ERQRILLLDT SKSPVESIRT GGRYDFIVEH DVKELGAHTL VCSALYNDAD GERKYLPQFF KFVVANPLSV
201: RTKVRVVKET TFLEACIENH TKANLFMDQV DFEPAKQWSA VRLQNEDSTE DPPTSGLSGL IPKPPVIIRS GGGIHNYLYK LNPSADVSGQ TKFQGSNILG
301: KFQITWRTNL GEPGRLQTQQ ILGAPVSRKE INMRVVEVPA VIHLNRPFRA YLNLTNQTDR QLGPFEVSLS QDETQLEKPV GINGLQTLML PRIEAFGSND
401: FQLNLIASKL GVQKIAGITA LDTREKKTYE LVPDMEIFVE TD
Arabidopsis Description
At2g47960/T9J23.10 [Source:UniProtKB/TrEMBL;Acc:O82263]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.