Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY23978 | Canola | cytosol | 90.31 | 37.98 |
| CDX97786 | Canola | cytosol, plastid | 89.29 | 34.93 |
| CDY29635 | Canola | cytosol, plastid | 88.78 | 34.59 |
| GSMUA_Achr4P32020_001 | Banana | cytosol | 2.04 | 4.08 |
| CDX84813 | Canola | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX84814 | EnsemblPlantsGene:GSBRNA2T00142118001 | ncoils:Coil | PANTHER:PTHR24356 | PANTHER:PTHR24356:SF306 | ProteinID:CDX84814 |
| ProteinID:CDX84814.1 | SEG:seg | UniParc:UPI0004EE91BB | MapMan:35.2 | : | : |
Description
BnaA03g14160D
Coordinates
chrLK031838:+:1380524..1381502
Molecular Weight (calculated)
21708.5 Da
IEP (calculated)
4.542
GRAVY (calculated)
-0.592
Length
196 amino acids
Sequence
(BLAST)
(BLAST)
001: MKPIDGPLDY LTIMKLSETA EAAVAAASAA HTMDEQRKIV SLEFERLRKT RERVVILEGA VVRAEEKARV AEASGEAKAK EASQGEATAW TEKQELLAYV
101: NMLQTQLQRQ QVETKQVFEE KTESTNGETS LPMTKETEKD VDKACLSVSR TASMPGENVV HMSEDEVVNA QAPVGENEWN DIQATEARVS DVKRNI
101: NMLQTQLQRQ QVETKQVFEE KTESTNGETS LPMTKETEKD VDKACLSVSR TASMPGENVV HMSEDEVVNA QAPVGENEWN DIQATEARVS DVKRNI
001: MASNGASPRI VDATENSLDK IKRQLASGSG RNLLQGPLFK RSETLRKWNE RWVILDPTTG KMEYKTRRNE PTIKGTILFD ENSTISISPV NFQGLPKYNG
101: CCIYIGTPQK KDYFLCAETP GAAKAWVTTL HATQLVLKAH KEAVESLSGS GSATLGTVAT VVAAANSTAL ECSREIQAAM QISLRNALKI TPNKPIDGPL
201: DDLTIMKETL RVKDEELHNL ARELRSRDSM IKEIADKLSE TAEAAVAAAS AAHTMDEQRK IVCVEFERLT TDSQRQQEAT KLKLKELEEK TFTLSKEKDQ
301: LVKERDAALQ EAHMWRSELG KARERVVILE GAVVRAEEKV RVAEASGEAK SKEASQREAT AWTEKQELLA YVNMLQTQLQ RQQLETKQVC EEKTESTNGE
401: ASLPMTKETE KNVDKACLSI SRTASIPGEN VVHMSEEQVV NAQPPVGENE WNDIQATEAR VSDVREISAE TERDRRNSLD IPVVSPEPNV PRNDPPSESF
501: HHQP
101: CCIYIGTPQK KDYFLCAETP GAAKAWVTTL HATQLVLKAH KEAVESLSGS GSATLGTVAT VVAAANSTAL ECSREIQAAM QISLRNALKI TPNKPIDGPL
201: DDLTIMKETL RVKDEELHNL ARELRSRDSM IKEIADKLSE TAEAAVAAAS AAHTMDEQRK IVCVEFERLT TDSQRQQEAT KLKLKELEEK TFTLSKEKDQ
301: LVKERDAALQ EAHMWRSELG KARERVVILE GAVVRAEEKV RVAEASGEAK SKEASQREAT AWTEKQELLA YVNMLQTQLQ RQQLETKQVC EEKTESTNGE
401: ASLPMTKETE KNVDKACLSI SRTASIPGEN VVHMSEEQVV NAQPPVGENE WNDIQATEAR VSDVREISAE TERDRRNSLD IPVVSPEPNV PRNDPPSESF
501: HHQP
Arabidopsis Description
At2g30880/F7F1.9 [Source:UniProtKB/TrEMBL;Acc:Q8VYJ6]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.