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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • extracellular 3
  • endoplasmic reticulum 4
  • vacuole 3
  • plasma membrane 5
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra019238.1-P Field mustard plasma membrane 98.16 98.16
CDY10997 Canola plasma membrane 86.3 88.28
AT4G24250.1 Thale cress plasma membrane 80.57 82.43
CDY34270 Canola plasma membrane 82.21 81.54
CDY03468 Canola plasma membrane 77.51 79.45
Solyc01g102520.2.1 Tomato plasma membrane 54.4 56.0
VIT_12s0035g02190.t01 Wine grape golgi, plasma membrane 50.1 54.93
PGSC0003DMT400047049 Potato cytosol, golgi, plasma membrane 44.58 52.66
Os02t0197200-01 Rice cytosol, golgi, plasma membrane 38.65 48.96
KRH11698 Soybean plasma membrane 49.28 48.59
GSMUA_Achr3P10960_001 Banana plasma membrane 50.1 46.05
CDX91294 Canola cytosol, golgi, plasma membrane 47.65 46.05
CDY21899 Canola cytosol, plasma membrane, vacuole 47.65 44.05
TraesCS7B01G285600.1 Wheat plasma membrane 44.17 42.69
CDY23418 Canola plasma membrane 44.38 42.47
CDX97279 Canola plasma membrane 40.49 42.22
CDY22065 Canola plasma membrane 40.08 41.97
KXG20348 Sorghum plasma membrane 43.15 41.78
GSMUA_Achr3P13510_001 Banana cytosol, golgi, plasma membrane 30.27 41.69
TraesCS7D01G379300.1 Wheat plasma membrane 42.74 41.22
TraesCS7A01G382900.2 Wheat golgi 42.54 41.03
TraesCS6B01G191900.1 Wheat plasma membrane 41.31 40.73
TraesCS6D01G153100.1 Wheat plasma membrane 41.1 40.36
TraesCS6A01G159400.1 Wheat plasma membrane 40.7 39.96
CDY23718 Canola plasma membrane 32.52 36.14
CDY37702 Canola plasma membrane 32.31 35.91
CDY03836 Canola cytosol, golgi, plasma membrane 34.36 35.67
CDY50221 Canola plasma membrane 16.56 35.53
Zm00001d046781_P001 Maize plasma membrane 41.92 35.34
CDY57371 Canola golgi, plasma membrane 31.9 34.98
HORVU6Hr1G033290.7 Barley plasma membrane 36.61 34.69
HORVU7Hr1G091040.14 Barley plasma membrane 40.29 34.5
CDY30455 Canola plasma membrane 44.99 32.74
CDY20991 Canola plasma membrane 34.76 30.74
CDY47582 Canola cytosol, golgi, plasma membrane 34.56 30.4
CDY19353 Canola golgi, plasma membrane 33.54 30.2
CDY07075 Canola plasma membrane 35.38 30.14
CDY14402 Canola plasma membrane 34.36 30.0
CDY30365 Canola plasma membrane 33.13 30.0
CDX97946 Canola plasma membrane 33.13 29.83
CDY26808 Canola golgi, plasma membrane 32.72 29.63
CDY14355 Canola plasma membrane 33.54 29.5
CDY28816 Canola plasma membrane 32.92 29.49
CDX96242 Canola endoplasmic reticulum, nucleus, plasma membrane 32.92 29.43
CDY16182 Canola cytosol, endoplasmic reticulum, plasma membrane 18.81 29.39
CDY15021 Canola plasma membrane 34.76 29.11
CDY26348 Canola plasma membrane 34.97 28.93
CDY34863 Canola endoplasmic reticulum, nucleus, plasma membrane 33.33 28.6
CDY34665 Canola plasma membrane 33.33 28.5
Os06t0610500-01 Rice extracellular, golgi, nucleus 7.36 28.12
CDY07665 Canola plasma membrane 29.86 28.02
CDY14401 Canola plasma membrane 29.86 27.86
CDY30363 Canola plasma membrane 33.13 27.36
CDY07669 Canola plasma membrane 28.83 27.33
CDY12904 Canola plasma membrane 32.31 27.15
CDY20802 Canola plasma membrane 32.92 27.06
CDY24339 Canola plasma membrane 32.92 27.06
CDY26810 Canola plasma membrane 32.92 26.79
CDX85048 Canola cytosol 11.45 26.54
CDY20220 Canola endoplasmic reticulum 33.74 24.89
Protein Annotations
EnsemblPlants:CDX92627EnsemblPlantsGene:GSBRNA2T00154428001GO:A0A078DUP6GO:GO:0005575GO:GO:0006950GO:GO:0006952
GO:GO:0008150GO:GO:0016020GO:GO:0016021InterPro:MloPANTHER:PTHR31942PANTHER:PTHR31942:SF24
PFAM:PF03094ProteinID:CDX92627ProteinID:CDX92627.1SEG:segTMHMM:TMhelixUniParc:UPI0004EF1454
MapMan:35.1:::::
Description
BnaC07g38850D
Coordinates
chrLK031873:-:46752..49545
Molecular Weight (calculated)
56303.8 Da
IEP (calculated)
8.986
GRAVY (calculated)
0.094
Length
489 amino acids
Sequence
(BLAST)
001: MAEERSLEYT PTWVVAFICF IIVLLSLLAE RGLHHLGKCL KRRRQDALFE ALQKLKEELM LLGFISLMLT VSQAAIRHIC VPRALVSNMF PCKKPLEKHH
101: APESSHTLSI SARHLLSTGA SPDHWAGSVS ICGSIASTPY LHLRASGFSR HLLCLNHGSW RSQGNIQQWK HWEGRFKKHP SQKEAVKRGH AQAHPHAHAL
201: HELFNANHEF FAMHAGGFWR RSVVISWLRS FFKQFYGSVT KSEYIALRQG FIMTHCPTNP SFNFHKYMLR TLEIDFKKVV SISWYLWLFV VVFLLLNVGG
301: WNTYFWLSFL PLILLLMVGA KLENIISTLA VDVCEKRNRA EEAVIKPSDE LFWFHKPEIV LQIIHFILFQ NSFEIAFFFW ILFTYGIRSC IMERLGFLIP
401: RLVMGVLVQV LCSYSTLPLY ALVTQMGSKF KKGIFDDVVQ STLEVWLEDT RSRGDSTSQA HRLEIQPTTP EAFNVQVDEV SECENPQVQ
Best Arabidopsis Sequence Match ( AT4G24250.1 )
(BLAST)
001: MAEARSGSLE YTPTWVVAFI CFIIVLLSLL AERGLHHLGK CLKRRQQDAL FEALQKLKEE LMLLGFISLM LTVSQAAIRH ICVPPALVNN MFPCKKPLEE
101: HHAPKSSHSI INNARHLLST GESPDHCAAK GQVPLVSVEA LHQLHIFIFV LAVFHVIFCA STMVLGGARI QQWKHWEDWF KKRPSQKGTT RRGHHAHAHE
201: LFSANHEFFE MHAGGFWRRS VVISWVRSFF KQFYGSVTKS EYIALRQAFI MSHCRTNPSF DFHKYMLRTL EIDFKKVVSI SWYLWLFVVV FLLLNVGGWN
301: TYFWLSFLPL ILLLMVGAKL EYIISSLALD VSEKRSRAEE AVITPSDELF WFHRPGIVLQ LIHFILFQNS FEIAFFFWIL FTYGIHSCIM EKLGYLIPRL
401: VMGVLVQVLC SYSTLPLYAL VTQMGSKFKK GIFDNVVQST LEGWLEDTRN RGESTSEAHR IEMQPTTPES YNVQSENP
Arabidopsis Description
MLO13MLO-like protein 13 [Source:UniProtKB/Swiss-Prot;Acc:Q94KB2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.