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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, plasma membrane, golgi

Predictor Summary:
  • nucleus 1
  • golgi 2
  • extracellular 1
  • plasma membrane 2
  • endoplasmic reticulum 1
  • vacuole 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, golgi, plasma membrane
Any Predictor:cytosol, golgi, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY57371 Canola golgi, plasma membrane 86.84 91.7
CDY47582 Canola cytosol, golgi, plasma membrane 98.09 83.09
CDY15021 Canola plasma membrane 93.63 75.51
CDY26348 Canola plasma membrane 93.21 74.28
CDY12904 Canola plasma membrane 86.41 69.93
AT1G61560.1 Thale cress plasma membrane 85.99 69.47
CDX97946 Canola plasma membrane 74.1 64.27
CDY50221 Canola plasma membrane 31.0 64.04
CDY19353 Canola golgi, plasma membrane 73.46 63.72
PGSC0003DMT400053117 Potato cytosol, golgi, plasma membrane 47.98 61.75
CDY20991 Canola plasma membrane 71.13 60.58
CDY07075 Canola plasma membrane 71.34 58.54
CDY07669 Canola plasma membrane 63.27 57.75
CDY07665 Canola plasma membrane 63.69 57.58
CDY14401 Canola plasma membrane 63.69 57.25
CDY14402 Canola plasma membrane 67.52 56.79
VIT_13s0019g04060.t01 Wine grape plasma membrane 64.76 56.59
KRH08381 Soybean plasma membrane 68.37 55.9
KRH70034 Soybean plasma membrane 67.3 55.32
KRH08380 Soybean plasma membrane 64.97 53.59
VIT_13s0019g04070.t01 Wine grape cytosol, golgi, plasma membrane 61.36 53.03
Solyc04g049090.2.1 Tomato nucleus 56.9 52.86
GSMUA_Achr8P11320_001 Banana plasma membrane 63.27 52.84
Solyc03g095650.2.1 Tomato cytosol, golgi, plasma membrane 57.32 52.22
GSMUA_AchrUn_... Banana golgi, plasma membrane, plastid 60.93 51.16
GSMUA_Achr4P04380_001 Banana cytosol, golgi, mitochondrion, plasma membrane 57.75 50.56
KRH34892 Soybean plasma membrane 56.69 49.81
KRG91873 Soybean plasma membrane 59.02 49.73
KRH70033 Soybean golgi 40.98 48.37
CDY23718 Canola plasma membrane 44.16 47.27
CDY37702 Canola plasma membrane 43.95 47.05
CDY30365 Canola plasma membrane 46.07 40.19
CDY26808 Canola golgi, plasma membrane 45.65 39.81
CDY16182 Canola cytosol, endoplasmic reticulum, plasma membrane 26.33 39.62
CDY03468 Canola plasma membrane 39.7 39.2
CDX85048 Canola cytosol 17.2 38.39
CDY34270 Canola plasma membrane 39.92 38.13
CDY10997 Canola plasma membrane 38.0 37.45
CDY30363 Canola plasma membrane 46.5 36.99
CDY24339 Canola plasma membrane 46.71 36.97
CDY20802 Canola plasma membrane 46.71 36.97
CDX91294 Canola cytosol, golgi, plasma membrane 39.49 36.76
CDY26810 Canola plasma membrane 46.28 36.27
CDY21899 Canola cytosol, plasma membrane, vacuole 39.92 35.54
CDX97279 Canola plasma membrane 35.24 35.39
CDX92627 Canola plasma membrane 35.67 34.36
CDY22065 Canola plasma membrane 33.76 34.05
CDY23418 Canola plasma membrane 36.73 33.86
CDX96242 Canola endoplasmic reticulum, nucleus, plasma membrane 37.58 32.36
CDY28816 Canola plasma membrane 37.16 32.05
CDY14355 Canola plasma membrane 37.79 32.01
CDY34863 Canola endoplasmic reticulum, nucleus, plasma membrane 34.18 28.25
CDY34665 Canola plasma membrane 34.18 28.15
CDY20220 Canola endoplasmic reticulum 37.79 26.85
CDY30455 Canola plasma membrane 36.94 25.89
Protein Annotations
EnsemblPlants:CDY03836EnsemblPlantsGene:GSBRNA2T00117291001GO:A0A078ERF6GO:GO:0005575GO:GO:0006950GO:GO:0006952
GO:GO:0008150GO:GO:0016020GO:GO:0016021InterPro:MloPANTHER:PTHR31942PANTHER:PTHR31942:SF34
PFAM:PF03094ProteinID:CDY03836ProteinID:CDY03836.1TMHMM:TMhelixUniParc:UPI0004EEB08BMapMan:35.1
Description
BnaC01g29530D
Coordinates
chrLK031946:-:1030365..1033244
Molecular Weight (calculated)
54558.3 Da
IEP (calculated)
10.108
GRAVY (calculated)
0.084
Length
471 amino acids
Sequence
(BLAST)
001: MADKVDERTL QQTSTWAVAV VCFFLLLISI VIEKLIHKLG NWFKRKNKKA LYEALEKVKA ELMLMGFISL LLTIGQNYIS QICVSESIAA SMRPCSRSEE
101: EKKYPNTKKD TGKDVGDEEN SGRKLLELVD SFIPRRSLAT KGYDKCAEKG QVAFVSSYGM HQLHIFIFVL AVCHVIYCIL TYALGKTKMR RWKRWEEETK
201: TIEYQYSHDP ERFRFARDTS FGRRHLNFWS KSTITLWIAC FFRQFFGSVT KVDYLTLRHG FIMAHLAPGS DARFDFRKYI QRSLEEDFKT IVEISPVIWF
301: VAVLFLLTNT NGLNSYVWQP FIPLVVILIV GTKLQVIITK LGLLIQEKGD IVKGMPLVQP GDHLFWFGRP RFILFLVHLV LFTNAFQLAF FAWTTYEFKL
401: KNCFHKNTVD VVIRISVGVI VQVLCSYVTL PLYALVTQMG SKMKPTVFNE RVAVALKSWH HTAKKQMKNR T
Best Arabidopsis Sequence Match ( AT1G61560.1 )
(BLAST)
001: MADQVKEKTL EETSTWAVAV VCFVLLLISI VIEKLIHKIG SWFKKKNKKA LYEALEKVKA ELMLMGFISL LLTIGQGYIS NICIPKNIAA SMHPCSASEE
101: ARKYGKKDVP KEDEEENLRR KLLQLVDSLI PRRSLATKGY DKCAEKGKVA FVSAYGMHQL HIFIFVLAVC HVIYCIVTYA LGKTKMRRWK KWEEETKTIE
201: YQYSHDPERF RFARDTSFGR RHLSFWSKST ITLWIVCFFR QFFRSVTKVD YLTLRHGFIM AHLAPGSDAR FDFRKYIQRS LEEDFKTIVE INPVIWFIAV
301: LFLLTNTNGL NSYLWLPFIP FIVILIVGTK LQVIITKLGL RIQEKGDVVK GTPLVQPGDH FFWFGRPRFI LFLIHLVLFT NAFQLAFFVW STYEFGLKNC
401: FHESRVDVII RISIGLLVQI LCSYVTLPLY ALVTQMGSKM KPTVFNERVA TALKSWHHTA KKNIKHGRTS ESTTPFSSRP TTPTHGSSPI HLLRNAPHKR
501: SRSVDESFAN SFSPRNSDFD SWDPESQHET AETSNSNHRS RFGEEESEKK FVSSSVELPP GPGQIRTQHE ISTISLRDFS FKR
Arabidopsis Description
MLO6MLO-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q94KB7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.