Skip to main content
crop-pal logo
Tomato
Search for another protein from :
Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 1
  • plasma membrane 8
  • extracellular 4
  • golgi 5
  • endoplasmic reticulum 4
  • vacuole 4
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:plastid, secretory
BaCelLo:plastid
EpiLoc:plasma membrane
iPSORT:secretory
MultiLoc:golgi
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
 nucleus: 28394025
msms PMID: 28394025 doi
AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc03g095650.2.1 Tomato cytosol, golgi, plasma membrane 67.65 66.34
VIT_13s0019g04060.t01 Wine grape plasma membrane 63.71 59.93
CDY50221 Canola plasma membrane 25.64 57.02
CDY03836 Canola cytosol, golgi, plasma membrane 52.86 56.9
VIT_13s0019g04070.t01 Wine grape cytosol, golgi, plasma membrane 61.14 56.88
KRH34892 Soybean plasma membrane 59.17 55.97
CDY57371 Canola golgi, plasma membrane 49.11 55.83
Bra017086.1-P Field mustard plasma membrane 53.45 55.65
KRH08381 Soybean plasma membrane 62.72 55.21
Solyc06g010030.2.1 Tomato plasma membrane 64.3 55.16
KRG91873 Soybean plasma membrane 60.75 55.1
Solyc11g069220.1.1 Tomato golgi, plasma membrane 54.83 54.94
KRH70034 Soybean plasma membrane 61.74 54.62
GSMUA_Achr8P11320_001 Banana plasma membrane 60.75 54.61
GSMUA_Achr4P04380_001 Banana cytosol, golgi, mitochondrion, plasma membrane 57.4 54.09
GSMUA_AchrUn_... Banana golgi, plasma membrane, plastid 59.76 54.01
AT2G39200.1 Thale cress plasma membrane 59.96 52.78
CDY47582 Canola cytosol, golgi, plasma membrane 57.4 52.34
AT1G11310.1 Thale cress plasma membrane 58.78 52.01
KRH70033 Soybean golgi 40.83 51.88
KRH08380 Soybean plasma membrane 58.38 51.84
AT1G61560.1 Thale cress plasma membrane 59.37 51.63
CDY14402 Canola plasma membrane 57.0 51.61
CDY07075 Canola plasma membrane 58.19 51.39
Bra027082.1-P Field mustard plasma membrane 58.97 51.37
Bra019869.1-P Field mustard golgi 57.2 50.7
CDY15021 Canola plasma membrane 58.38 50.68
Bra038585.1-P Field mustard golgi, nucleus, plasma membrane 58.58 50.34
CDY07665 Canola plasma membrane 51.48 50.1
Bra016840.1-P Field mustard plasma membrane 54.64 50.09
CDY26348 Canola plasma membrane 58.38 50.08
Bra031763.1-P Field mustard golgi 54.24 50.0
CDY14401 Canola plasma membrane 51.48 49.81
CDX97946 Canola plasma membrane 53.25 49.72
CDY20991 Canola plasma membrane 54.04 49.55
CDY07669 Canola plasma membrane 50.3 49.42
CDY19353 Canola golgi, plasma membrane 52.66 49.17
Bra000122.1-P Field mustard plasma membrane 52.66 48.55
Bra031426.1-P Field mustard plasma membrane 45.36 45.82
CDY12904 Canola plasma membrane 52.07 45.36
Solyc06g010010.1.1 Tomato plasma membrane 39.45 41.93
Solyc02g077570.1.1 Tomato plasma membrane 30.37 41.07
Solyc02g082430.2.1 Tomato plasma membrane 43.98 40.33
Solyc08g067760.2.1 Tomato plasma membrane 41.81 39.85
Solyc01g102520.2.1 Tomato plasma membrane 36.69 39.16
Solyc08g015870.2.1 Tomato cytosol, golgi, plasma membrane 37.67 37.9
Solyc09g018830.2.1 Tomato cytosol, golgi, peroxisome 20.12 37.78
Solyc06g082820.2.1 Tomato cytosol, golgi, plasma membrane 35.9 35.62
Solyc02g083720.2.1 Tomato cytosol, endoplasmic reticulum, plasma membrane 32.54 30.96
Solyc07g063260.2.1 Tomato plasma membrane 33.92 30.55
Solyc10g044510.1.1 Tomato plasma membrane 31.76 28.85
Protein Annotations
MapMan:35.1EMBL:AY967408GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005516
GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006950GO:GO:0006952GO:GO:0008150
GO:GO:0009607GO:GO:0016020GO:GO:0016021EMBL:KU759512InterPro:MloPFAM:PF03094
PANTHER:PTHR31942PANTHER:PTHR31942:SF34UniProt:Q56BA6EnsemblPlantsGene:Solyc04g049090.2EnsemblPlants:Solyc04g049090.2.1TMHMM:TMhelix
UniParc:UPI00005001FFSEG:seg::::
Description
MLO-like protein [Source:UniProtKB/TrEMBL;Acc:Q56BA6]
Coordinates
chr4:-:39552675..39558181
Molecular Weight (calculated)
58368.1 Da
IEP (calculated)
8.955
GRAVY (calculated)
0.091
Length
507 amino acids
Sequence
(BLAST)
001: MEATPTWAIA VVCFILLAIS IFIEQIIHHI GEWLLEKRKK SLYEALEKIK AELMLLGFLS LLLTVLQDPV SNLCVPKSVG YSWHPCMAKE DAKSEYDDPC
101: LPKGKVQFAS SYAIHQLHIF IFVLAVAHVL YCIATFALGR LKMRKWRAWE DETKTMEYQF YNDPERFRFA RETSFGRRHL HFWSKSPVLL SIVCFFRQFF
201: SSVAKVDYLT LRHGFMMAHL TPQNQNNFDF QLYINRAVDK DFKVVVGISP ALWLFTVLYF LTTTDRLYSY LWVPFIPLVI ILLVGTKLQM IITEMGVRIS
301: ERGDIVKGVP VVETGDHLFW FNRPALVLFL INFVLFQNAF QVAFFFWSWW KFGFPSCFHK NAADLAIRLT MGVIIQVHCS YVTLPLYALV TQMGSSMKPI
401: IFGDNVATAL RSWHHTAKKR VKHGLSGHTT PANSRPTTPL RGTSPVHLLR GYPQYNEDSV QASPRTSNVE NEGWANENQE GEILQHASTD HNKQIEITMS
501: DFTFGNK
Best Arabidopsis Sequence Match ( AT1G61560.1 )
(BLAST)
001: MADQVKEKTL EETSTWAVAV VCFVLLLISI VIEKLIHKIG SWFKKKNKKA LYEALEKVKA ELMLMGFISL LLTIGQGYIS NICIPKNIAA SMHPCSASEE
101: ARKYGKKDVP KEDEEENLRR KLLQLVDSLI PRRSLATKGY DKCAEKGKVA FVSAYGMHQL HIFIFVLAVC HVIYCIVTYA LGKTKMRRWK KWEEETKTIE
201: YQYSHDPERF RFARDTSFGR RHLSFWSKST ITLWIVCFFR QFFRSVTKVD YLTLRHGFIM AHLAPGSDAR FDFRKYIQRS LEEDFKTIVE INPVIWFIAV
301: LFLLTNTNGL NSYLWLPFIP FIVILIVGTK LQVIITKLGL RIQEKGDVVK GTPLVQPGDH FFWFGRPRFI LFLIHLVLFT NAFQLAFFVW STYEFGLKNC
401: FHESRVDVII RISIGLLVQI LCSYVTLPLY ALVTQMGSKM KPTVFNERVA TALKSWHHTA KKNIKHGRTS ESTTPFSSRP TTPTHGSSPI HLLRNAPHKR
501: SRSVDESFAN SFSPRNSDFD SWDPESQHET AETSNSNHRS RFGEEESEKK FVSSSVELPP GPGQIRTQHE ISTISLRDFS FKR
Arabidopsis Description
MLO6MLO-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q94KB7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.