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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, cytosol

Predictor Summary:
  • nucleus 1
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, golgi, plasma membrane
Any Predictor:cytosol, golgi, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY03836 Canola cytosol, golgi, plasma membrane 83.09 98.09
Bra031426.1-P Field mustard plasma membrane 83.09 92.03
CDY57371 Canola golgi, plasma membrane 73.02 91.03
CDY15021 Canola plasma membrane 91.91 87.5
CDY26348 Canola plasma membrane 91.73 86.29
AT1G61560.1 Thale cress plasma membrane 82.73 78.9
CDY12904 Canola plasma membrane 78.6 75.09
CDX97946 Canola plasma membrane 68.88 70.53
CDY19353 Canola golgi, plasma membrane 68.53 70.17
CDY20991 Canola plasma membrane 66.73 67.09
CDY07669 Canola plasma membrane 60.79 65.5
CDY07075 Canola plasma membrane 66.55 64.46
CDY14402 Canola plasma membrane 64.57 64.11
CDY07665 Canola plasma membrane 59.89 63.92
CDY14401 Canola plasma membrane 59.89 63.55
CDY50221 Canola plasma membrane 25.9 63.16
PGSC0003DMT400053117 Potato cytosol, golgi, plasma membrane 40.47 61.48
VIT_13s0019g04060.t01 Wine grape plasma membrane 59.35 61.22
KRH08381 Soybean plasma membrane 62.41 60.24
KRH70034 Soybean plasma membrane 61.87 60.03
KRH08380 Soybean plasma membrane 60.43 58.84
Solyc04g049090.2.1 Tomato nucleus 52.34 57.4
GSMUA_Achr8P11320_001 Banana plasma membrane 58.09 57.27
VIT_13s0019g04070.t01 Wine grape cytosol, golgi, plasma membrane 55.94 57.06
GSMUA_AchrUn_... Banana golgi, plasma membrane, plastid 56.3 55.79
KRH70033 Soybean golgi 39.93 55.64
Solyc03g095650.2.1 Tomato cytosol, golgi, plasma membrane 51.26 55.13
KRH34892 Soybean plasma membrane 53.06 55.04
KRG91873 Soybean plasma membrane 54.5 54.2
GSMUA_Achr4P04380_001 Banana cytosol, golgi, mitochondrion, plasma membrane 51.98 53.72
CDY23718 Canola plasma membrane 37.23 47.05
CDY37702 Canola plasma membrane 37.05 46.82
CDY30365 Canola plasma membrane 40.11 41.3
CDY26808 Canola golgi, plasma membrane 39.75 40.93
CDY30363 Canola plasma membrane 42.09 39.53
CDY03468 Canola plasma membrane 33.81 39.41
CDY16182 Canola cytosol, endoplasmic reticulum, plasma membrane 22.12 39.3
CDY26810 Canola plasma membrane 41.91 38.77
CDY20802 Canola plasma membrane 41.37 38.66
CDY24339 Canola plasma membrane 41.37 38.66
CDY34270 Canola plasma membrane 33.99 38.34
CDX85048 Canola cytosol 14.39 37.91
CDX91294 Canola cytosol, golgi, plasma membrane 34.35 37.75
CDY10997 Canola plasma membrane 32.37 37.66
CDY21899 Canola cytosol, plasma membrane, vacuole 34.89 36.67
CDX97279 Canola plasma membrane 30.58 36.25
CDY22065 Canola plasma membrane 29.86 35.55
CDY23418 Canola plasma membrane 32.19 35.03
CDX92627 Canola plasma membrane 30.4 34.56
CDY28816 Canola plasma membrane 32.91 33.52
CDX96242 Canola endoplasmic reticulum, nucleus, plasma membrane 32.73 33.27
CDY14355 Canola plasma membrane 32.91 32.91
CDY34665 Canola plasma membrane 30.22 29.37
CDY34863 Canola endoplasmic reticulum, nucleus, plasma membrane 30.04 29.3
CDY20220 Canola endoplasmic reticulum 33.09 27.75
CDY30455 Canola plasma membrane 32.37 26.79
Protein Annotations
MapMan:35.1GO:A0A078IBU0UniProt:A0A078IBU0EnsemblPlants:CDY47582ProteinID:CDY47582ProteinID:CDY47582.1
GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005516GO:GO:0005575GO:GO:0006950
GO:GO:0006952GO:GO:0008150GO:GO:0009607GO:GO:0016020GO:GO:0016021EnsemblPlantsGene:GSBRNA2T00087677001
InterPro:MloPFAM:PF03094PANTHER:PTHR31942PANTHER:PTHR31942:SF34TMHMM:TMhelixUniParc:UPI0004EE0C5D
SEG:seg:::::
Description
BnaA01g22680DMLO-like protein [Source:UniProtKB/TrEMBL;Acc:A0A078IBU0]
Coordinates
chrLK032723:-:59380..62524
Molecular Weight (calculated)
64064.0 Da
IEP (calculated)
10.056
GRAVY (calculated)
-0.088
Length
556 amino acids
Sequence
(BLAST)
001: MADKVADKVA EKVAERTLQQ TSTWAVAVVC FFLLLISIVI EKLIHKLGNW FKRKNKKALY EALEKVKAEL MLMGFISLLL TIGQNYISQI CVSESVAASM
101: RPCSRSEEEK KYPNTKKDTG KDLGDEENSG RKLLELVESF IPRRSLATKG YDKCAEKGQV AFVSSYGMHQ LHIFIFVLAV CHVIYCILTY ALGKTKMRRW
201: KRWEEETKTI EYQYSHDPER FRFARDTSFG RRHLNFWSKS TITLWIACFF RQFFGSVTKV DYLTLRHGFI MAHLAPGSDA RFDFRKYIQR SLEEDFKTIV
301: EISPVIWFVA VLFLLTNTNG LNSYVWQPFI PLVVILIVGT KLQVIITKLG LLIQEKGDIV KGMPLVQPGD HLFWFGRPRF ILFLVHLVLF TNAFQLAFFA
401: WTTYEFKLKN CFHKNTVDVV IRISVGVIVQ VLCSYVTLPL YALVTQMGSK MKPTVFNERV AVALKSWHHT AKKQMKHGRT SESTTPFSSR PATPTHGSSP
501: IHLLHNVHKR SRSADESFAN SMSPRRNSDF DTWDVESQQE PSSSSVKYHS RFREEI
Best Arabidopsis Sequence Match ( AT1G61560.1 )
(BLAST)
001: MADQVKEKTL EETSTWAVAV VCFVLLLISI VIEKLIHKIG SWFKKKNKKA LYEALEKVKA ELMLMGFISL LLTIGQGYIS NICIPKNIAA SMHPCSASEE
101: ARKYGKKDVP KEDEEENLRR KLLQLVDSLI PRRSLATKGY DKCAEKGKVA FVSAYGMHQL HIFIFVLAVC HVIYCIVTYA LGKTKMRRWK KWEEETKTIE
201: YQYSHDPERF RFARDTSFGR RHLSFWSKST ITLWIVCFFR QFFRSVTKVD YLTLRHGFIM AHLAPGSDAR FDFRKYIQRS LEEDFKTIVE INPVIWFIAV
301: LFLLTNTNGL NSYLWLPFIP FIVILIVGTK LQVIITKLGL RIQEKGDVVK GTPLVQPGDH FFWFGRPRFI LFLIHLVLFT NAFQLAFFVW STYEFGLKNC
401: FHESRVDVII RISIGLLVQI LCSYVTLPLY ALVTQMGSKM KPTVFNERVA TALKSWHHTA KKNIKHGRTS ESTTPFSSRP TTPTHGSSPI HLLRNAPHKR
501: SRSVDESFAN SFSPRNSDFD SWDPESQHET AETSNSNHRS RFGEEESEKK FVSSSVELPP GPGQIRTQHE ISTISLRDFS FKR
Arabidopsis Description
MLO6MLO-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q94KB7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.