CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29646	Canola	cytosol	98.1	98.37
Bra021663.1-P	Field mustard	cytosol	96.75	97.01
CDY23984	Canola	cytosol	92.95	94.49
CDX84819	Canola	cytosol	92.41	93.94
CDY47124	Canola	cytosol	91.33	92.58
CDY10754	Canola	cytosol	91.33	92.33
AT2G30740.5	Thale cress	cytosol	89.97	90.71
CDY06223	Canola	cytosol	82.93	84.3
CDY09961	Canola	cytosol	82.38	83.06
CDY10217	Canola	cytosol	80.49	81.37
AT2G30730.2	Thale cress	cytosol	76.42	81.03
CDY48696	Canola	cytosol	46.34	78.44
CDX67793	Canola	cytosol	73.71	74.32
CDY06658	Canola	plasma membrane	80.22	72.55
CDY63020	Canola	cytosol, plasma membrane, plastid	18.97	71.43
CDY57492	Canola	cytosol	76.42	70.5
CDY06011	Canola	cytosol	76.69	70.22
CDX98366	Canola	cytosol	73.17	69.23
CDX89020	Canola	cytosol	76.15	69.04
CDY00615	Canola	cytosol	76.15	69.04
CDY37782	Canola	cytosol	66.67	67.77
CDX80077	Canola	cytosol	66.67	67.77
CDX79833	Canola	cytosol	75.61	67.72
CDY30389	Canola	cytosol	75.07	67.56
CDY23345	Canola	cytosol	75.07	67.56
CDY48695	Canola	cytosol	66.12	67.03
CDY63018	Canola	cytosol	66.12	67.03
CDY17940	Canola	cytosol	74.53	66.91
CDY48698	Canola	plasma membrane	20.05	65.49
CDX82369	Canola	cytosol	64.5	65.38
CDX75915	Canola	cytosol	63.96	65.01
CDX77331	Canola	cytosol	63.14	64.54
CDY22548	Canola	cytosol	62.33	63.19
CDY35391	Canola	cytosol	62.33	63.19
CDX79897	Canola	cytosol	62.6	62.94
CDY64576	Canola	cytosol	62.33	62.67
CDY14807	Canola	cytosol	62.06	62.57
CDY06890	Canola	cytosol	62.06	62.57
CDY50915	Canola	mitochondrion	15.72	60.42
CDX83345	Canola	mitochondrion	17.62	56.52
CDX92130	Canola	plasma membrane	65.85	56.12
CDY18322	Canola	cytosol	16.8	53.91
GSMUA_Achr5P25660_001	Banana	cytosol, mitochondrion, nucleus, plastid	51.49	53.37
CDX95854	Canola	plastid	66.12	53.16
GSMUA_Achr2P20880_001	Banana	mitochondrion	57.72	52.33
EES11040	Sorghum	cytosol	47.97	47.58
Zm00001d003212_P001	Maize	cytosol	47.7	47.06
TraesCS2B01G366600.1	Wheat	cytosol	46.61	46.61
TraesCS2A01G348200.1	Wheat	cytosol	45.8	45.8
TraesCS2D01G346600.1	Wheat	cytosol	45.8	45.8

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.38.1	Gene3D:3.30.200.20	GO:A0A078E6N8	EnsemblPlants:CDX97800	ProteinID:CDX97800
ProteinID:CDX97800.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004713
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00105103001	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00109	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF115	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00219	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Tyr_kinase_AS	InterPro:Tyr_kinase_cat_dom	UniParc:UPI0004EF304A	SEG:seg	:

Description

BnaC04g41390D

Coordinates

chrLK031901:-:561918..564566

Molecular Weight (calculated)

40686.6 Da

IEP (calculated)

7.590

GRAVY (calculated)

-0.404

Length

369 amino acids

Sequence
(BLAST)

001: MRRWICCGRI SGGDSGLSND EQHLKTQWQQ QQQPDAANQK LRPQPAAKPD APKEALPIEV PPLSVEEVKE KTDNFGSKSL IGEGSYGRVY YATLNDGKAV
101: ALKKLDVAPE AETNSEFLSQ VSMVSRLKHD NLIQLVGYCV DEDLRVLAYE FATMGSLHDV LHGRKGVQGA QPGPTLDWIT RVKIAVEAAR GLEYLHEKVQ
201: PPVIHRDVRS SNVLLFEDYQ AKIADFNLSN QAPDNAARLH STRVLGTFGY HAPEYAMTGQ LTQKSDVYSF GVVLLELLTG RKPVDHTMPR GQQSLVTWAT
301: PRLSEDKVKQ CVDPKLKGEY PPKSVAKLAA VAALCVQYES EFRPNMSIVV KALQPLLKPP APAAPTPES

Best Arabidopsis Sequence Match ( AT2G30740.12 )
(BLAST)

001: MRRWICCGDK KGDSDLSNEE VHLKSPWQNS EANQKNQKPQ AVVKPEAQKE ALPIEVPPLS VDEVKEKTDN FGSKSLIGEG SYGRVYYATL NDGKAVALKK
101: LDVAPEAETN TEFLNQVSMV SRLKHENLIQ LVGYCVDENL RVLAYEFATM GSLHDILHGR KGVQGAQPGP TLDWLTRVKI AVEAARGLEY LHEKVQPPVI
201: HRDIRSSNVL LFEDYQAKVA DFNLSNQAPD NAARLHSTRV LGTFGYHAPE YAMTGQLTQK SDVYSFGVVL LELLTGRKPV DHTMPRGQQS LVTWATPRLS
301: EDKVKQCVDP KLKGEYPPKS VAKLAAVAAL CVQYESEFRP NMSIVVKALQ PLLKPPAPAP APVPES

Arabidopsis Description

PTI12PTI1-like tyrosine-protein kinase 2 [Source:UniProtKB/Swiss-Prot;Acc:O49339]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.