CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX84819	Canola	cytosol	98.9	98.9
Bra022812.1-P	Field mustard	cytosol	98.07	98.07
CDY47124	Canola	cytosol	95.04	94.78
CDY10754	Canola	cytosol	95.04	94.52
CDX97800	Canola	cytosol, mitochondrion	94.49	92.95
CDY29646	Canola	cytosol	94.21	92.93
AT2G30740.5	Thale cress	cytosol	92.29	91.53
CDY06223	Canola	cytosol	83.2	83.2
CDY09961	Canola	cytosol	83.2	82.51
CDY10217	Canola	cytosol	80.99	80.55
AT2G30730.2	Thale cress	cytosol	77.14	80.46
CDY48696	Canola	cytosol	46.83	77.98
CDX67793	Canola	cytosol	74.38	73.77
CDY06658	Canola	plasma membrane	80.44	71.57
CDY63020	Canola	cytosol, plasma membrane, plastid	19.28	71.43
CDY57492	Canola	cytosol	77.14	70.0
CDY06011	Canola	cytosol	77.41	69.73
CDX89020	Canola	cytosol	77.41	69.04
CDY00615	Canola	cytosol	77.41	69.04
CDX98366	Canola	cytosol	73.83	68.72
CDX79833	Canola	cytosol	77.14	67.96
CDX80077	Canola	cytosol	67.49	67.49
CDY37782	Canola	cytosol	67.49	67.49
CDY17940	Canola	cytosol	76.31	67.4
CDY23345	Canola	cytosol	75.76	67.07
CDY30389	Canola	cytosol	75.76	67.07
CDY63018	Canola	cytosol	66.39	66.21
CDY48695	Canola	cytosol	66.39	66.21
CDY48698	Canola	plasma membrane	20.39	65.49
CDX82369	Canola	cytosol	65.29	65.11
CDX75915	Canola	cytosol	64.74	64.74
CDX77331	Canola	cytosol	63.91	64.27
CDY22548	Canola	cytosol	63.36	63.19
CDY35391	Canola	cytosol	63.36	63.19
CDX79897	Canola	cytosol	63.64	62.94
CDY64576	Canola	cytosol	63.36	62.67
CDY14807	Canola	cytosol	63.09	62.57
CDY06890	Canola	cytosol	63.09	62.57
CDY50915	Canola	mitochondrion	16.25	61.46
CDX83345	Canola	mitochondrion	18.18	57.39
CDX92130	Canola	plasma membrane	66.12	55.43
GSMUA_Achr5P25660_001	Banana	cytosol, mitochondrion, nucleus, plastid	52.07	53.09
CDY18322	Canola	cytosol	16.8	53.04
CDX95854	Canola	plastid	66.39	52.51
GSMUA_Achr2P20880_001	Banana	mitochondrion	58.68	52.33
EES11040	Sorghum	cytosol	48.48	47.31
Zm00001d003212_P001	Maize	cytosol	47.93	46.52
TraesCS2B01G366600.1	Wheat	cytosol	46.83	46.07
TraesCS2A01G348200.1	Wheat	cytosol	46.01	45.26
TraesCS2D01G346600.1	Wheat	cytosol	46.01	45.26

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.38.1	Gene3D:3.30.200.20	GO:A0A078GF59	UniProt:A0A078GF59	EnsemblPlants:CDY23984
ProteinID:CDY23984	ProteinID:CDY23984.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004713	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0018108	GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00024499001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00107
ScanProsite:PS00109	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF115	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00219	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Tyr_kinase_AS	InterPro:Tyr_kinase_cat_dom	UniParc:UPI0004EBE84C
SEG:seg	:	:	:	:	:

Description

BnaC03g17070DBnaC03g17070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GF59]

Coordinates

chrLK032152:-:319323..321681

Molecular Weight (calculated)

40063.8 Da

IEP (calculated)

7.056

GRAVY (calculated)

-0.381

Length

363 amino acids

Sequence
(BLAST)

001: MPRWICCGGH RSGDSDISND EKHLKTQWQQ PDANKTRPQA VAKPEAPKEA LPIEVPPLSV EEVEEKTDNF GSKSLIGEGS YGRVYYATLS DGKAVALKKL
101: DVAPEAETNT EFLSQVSMVS RLKHDNFIQL VGYCVDENLR VLAYEFATMG SLHDVLHGRK GVQGAQPGPT LDWITRVKIA VEAARGLEYL HEKVQPPVIH
201: RDVRSSNVLL FEDYQAKVAD FNLSNQAPDN AARLHSTRVL GTFGYHAPEY AMTGQLTQKS DVYSFGVVLL ELLTGRKPVD HTMPRGQQSL VTWATPRLSE
301: DKVKQCVDPK LKGEYPPKSV AKLAAVAALC VQYESEFRPN MSIVVKALQP LLKPPAPAPV PES

Best Arabidopsis Sequence Match ( AT2G30740.9 )
(BLAST)

001: MRRWICCGDK KGDSDLSNEE VHLKSPWQNS EANQKNQKPQ AVVKPEAQKE ALPIEVPPLS VDEVKEKTDN FGSKSLIGEG SYGRVYYATL NDGKAVALKK
101: LDVAPEAETN TEFLNQVSMV SRLKHENLIQ LVGYCVDENL RVLAYEFATM GSLHDILHGR KGVQGAQPGP TLDWLTRVKI AVEAARGLEY LHEKVQPPVI
201: HRDIRSSNVL LFEDYQAKVA DFNLSNQAPD NAARLHSTRV LGTFGYHAPE YAMTGQLTQK SDVYSFGVVL LELLTGRKPV DHTMPRGQQS LVTWATPRLS
301: EDKVKQCVDP KLKGEYPPKS VAKLAAVAAL CVQYESEFRP NMSIVVKALQ PLLKPPAPAP APVPES

Arabidopsis Description

PTI12PTI1-like tyrosine-protein kinase 2 [Source:UniProtKB/Swiss-Prot;Acc:O49339]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.