CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra021242.1-P	Field mustard	cytosol	99.45	99.45
CDY63018	Canola	cytosol	99.18	99.18
CDY48696	Canola	cytosol	57.97	96.79
AT3G17410.2	Thale cress	cytosol	93.13	93.13
CDY63020	Canola	cytosol, plasma membrane, plastid	24.18	89.8
CDX75915	Canola	cytosol	87.09	87.33
CDX82369	Canola	cytosol	87.09	87.09
CDX77331	Canola	cytosol	82.42	83.1
CDY48698	Canola	plasma membrane	25.0	80.53
CDX92130	Canola	plasma membrane	93.13	78.29
CDX80077	Canola	cytosol	75.82	76.03
CDY37782	Canola	cytosol	75.82	76.03
CDX95854	Canola	plastid	93.41	74.07
Os01t0323100-01	Rice	cytosol, plasma membrane	69.78	68.46
TraesCS3A01G193400.1	Wheat	cytosol	68.96	68.39
TraesCS3B01G221500.1	Wheat	cytosol	68.68	68.12
Zm00001d040695_P001	Maize	plasma membrane	69.78	67.91
CDY23984	Canola	cytosol	66.21	66.39
EES02884	Sorghum	cytosol	69.23	66.14
CDX97800	Canola	cytosol, mitochondrion	67.03	66.12
CDY06223	Canola	cytosol	65.93	66.12
CDX84819	Canola	cytosol	65.93	66.12
CDY29646	Canola	cytosol	66.76	66.03
CDY10754	Canola	cytosol	65.93	65.75
CDY09961	Canola	cytosol	65.93	65.57
CDY10217	Canola	cytosol	65.66	65.48
CDY47124	Canola	cytosol	65.38	65.38
TraesCS3D01G196000.1	Wheat	cytosol	68.96	65.36
CDX67793	Canola	cytosol	65.38	65.03
CDY50915	Canola	mitochondrion	17.03	64.58
CDX83345	Canola	mitochondrion	20.05	63.48
CDY22548	Canola	cytosol	62.64	62.64
CDY35391	Canola	cytosol	62.64	62.64
CDX79897	Canola	cytosol	62.36	61.85
CDY64576	Canola	cytosol	62.09	61.58
CDY06890	Canola	cytosol	61.54	61.2
CDY14807	Canola	cytosol	61.54	61.2
CDX98366	Canola	cytosol	64.84	60.51
CDY06011	Canola	cytosol	65.66	59.31
CDY57492	Canola	cytosol	65.11	59.25
CDX89020	Canola	cytosol	65.93	58.97
CDY06658	Canola	plasma membrane	65.93	58.82
CDY00615	Canola	cytosol	65.66	58.72
CDY30389	Canola	cytosol	65.93	58.54
CDY23345	Canola	cytosol	65.93	58.54
HORVU3Hr1G041820.12	Barley	cytosol	60.44	58.51
CDX79833	Canola	cytosol	65.66	58.01
CDY17940	Canola	cytosol	65.38	57.91
TraesCSU01G219500.1	Wheat	cytosol	34.34	57.08
CDY18322	Canola	cytosol	13.19	41.74

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.38.1	Gene3D:3.30.200.20	GO:A0A078ICS0	UniProt:A0A078ICS0	EnsemblPlants:CDY48695
ProteinID:CDY48695	ProteinID:CDY48695.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00091580001
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF514	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EDEA87	SEG:seg	:

Description

BnaCnng16720DBnaCnng16720D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ICS0]

Coordinates

chrLK032787:+:16555..19153

Molecular Weight (calculated)

39685.5 Da

IEP (calculated)

8.863

GRAVY (calculated)

-0.290

Length

364 amino acids

Sequence
(BLAST)

001: MSCFGCFGGG EDFRRVSETG PKPFHNRDGI NAHHHKADPP KNSPVIQMQP ISVPAIPADE LKDITDNYGS KSLIGEGSYG RVFYGVLKTG NAAAIKKLDS
101: SKQPDQEFLA QVSMVSRLRQ DNVVALLGYC VDGPLRVLAY EFASNGSLHD ILHGIKGVKG AQPGPVLSWN QRVKIAVGAA RGLEYLHEKA NTHVIHRDIK
201: SSNVLLFDDD IAKIADFDLS NQAPDMAARL HSTRVLGTFG YHAPEYAMTG TLSTKSDVYS FGVVLLELLT GRKPVDHTLP RGQQSLVTWA TPKLSEDKVK
301: QCVDARLNGE YPPKAVAKLA AVAALCVQYE ADFRPNMSIV VKALQPLLNP PRSAPQTPHR NNPY

Best Arabidopsis Sequence Match ( AT3G17410.1 )
(BLAST)

001: MGCFGCCGGG EDFRRVSETG PKPVHNTGGY NGGHHQRADP PKNLPVIQMQ PISVAAIPAD ELRDITDNYG SKSLIGEGSY GRVFYGILKS GKAAAIKKLD
101: SSKQPDQEFL AQVSMVSRLR QENVVALLGY CVDGPLRVLA YEYAPNGSLH DILHGRKGVK GAQPGPVLSW HQRVKIAVGA ARGLEYLHEK ANPHVIHRDI
201: KSSNVLLFDD DVAKIADFDL SNQAPDMAAR LHSTRVLGTF GYHAPEYAMT GTLSTKSDVY SFGVVLLELL TGRKPVDHTL PRGQQSVVTW ATPKLSEDKV
301: KQCVDARLNG EYPPKAVAKL AAVAALCVQY EADFRPNMSI VVKALQPLLN PPRSAPQTPH RNPY

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LUT0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.