Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, endoplasmic reticulum, plastid, extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 3
- endoplasmic reticulum 3
- vacuole 2
- plasma membrane 2
- golgi 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY68949 | Canola | cytosol | 91.78 | 53.6 |
| AT5G61360.1 | Thale cress | cytosol | 69.86 | 24.29 |
| CDX78308 | Canola | cytosol | 57.53 | 17.14 |
| CDX81068 | Canola | cytosol | 52.05 | 16.03 |
Protein Annotations
| EnsemblPlants:CDY02153 | EnsemblPlantsGene:GSBRNA2T00113554001 | GO:A0A078ERJ4 | PANTHER:PTHR37206 | PANTHER:PTHR37206:SF1 | ProteinID:CDY02153 |
| ProteinID:CDY02153.1 | TMHMM:TMhelix | UniParc:UPI0004EE2A2B | MapMan:35.2 | : | : |
Description
BnaA03g40140D
Coordinates
chrLK031932:-:416268..416587
Molecular Weight (calculated)
8784.8 Da
IEP (calculated)
9.427
GRAVY (calculated)
-0.205
Length
73 amino acids
Sequence
(BLAST)
(BLAST)
1: MVSCLCSFSE TLRSFYPVIV VVIWWWMRNR ARRRGETEAH LRESIKERDE VIAKLLHQIV QMSELLIEKK HSN
001: MVEGEEQRRI THLDLRNEPQ FPMVFVREST CFAKDDLAIF PPINHENLYV NGLESPSVSS SSSSSSSRLS DSSFSPSDSD EQFQFSRKSH SQPSEDVGKS
101: PWKSVIEIDI IQGWWKILLA RVMSNFQNLV TCFSRNSLCS FSKTLRSFYS VMVIFLWWWK RNRTRRRLEK GEIIAAHLRD TIKERDERIA QLLHQITQMN
201: ELLVKITHSN
101: PWKSVIEIDI IQGWWKILLA RVMSNFQNLV TCFSRNSLCS FSKTLRSFYS VMVIFLWWWK RNRTRRRLEK GEIIAAHLRD TIKERDERIA QLLHQITQMN
201: ELLVKITHSN
Arabidopsis Description
At5g61360 [Source:UniProtKB/TrEMBL;Acc:Q9FLJ7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.