Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY02153 | Canola | endoplasmic reticulum, extracellular, mitochondrion, plastid | 53.6 | 91.78 |
| AT5G61360.1 | Thale cress | cytosol | 55.2 | 32.86 |
| CDX81068 | Canola | cytosol | 44.0 | 23.21 |
| CDX78308 | Canola | cytosol | 44.8 | 22.86 |
Protein Annotations
| EnsemblPlants:CDY68949 | EnsemblPlantsGene:GSBRNA2T00081468001 | PANTHER:PTHR37206 | PANTHER:PTHR37206:SF1 | ProteinID:CDY68949 | ProteinID:CDY68949.1 |
| UniParc:UPI0004EDE563 | UniProt:A0A078JQ81 | MapMan:35.2 | : | : | : |
Description
BnaCnng61160DBnaCnng61160D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JQ81]
Coordinates
chrLK038318:+:1555..2034
Molecular Weight (calculated)
14837.0 Da
IEP (calculated)
10.390
GRAVY (calculated)
-0.403
Length
125 amino acids
Sequence
(BLAST)
(BLAST)
001: TDGKSPPSDS GDKSRWTTFL RYYSALETSS IIQRWWKLLL ARVLPKFRTM ASCLCSFSET LRSFYPVIVV VTWWWMRNRA RLRLHGGETE VHLRESIKER
101: DERIAQLLHQ IVQMSELLIE KKHSN
101: DERIAQLLHQ IVQMSELLIE KKHSN
001: MVEGEEQRRI THLDLRNEPQ FPMVFVREST CFAKDDLAIF PPINHENLYV NGLESPSVSS SSSSSSSRLS DSSFSPSDSD EQFQFSRKSH SQPSEDVGKS
101: PWKSVIEIDI IQGWWKILLA RVMSNFQNLV TCFSRNSLCS FSKTLRSFYS VMVIFLWWWK RNRTRRRLEK GEIIAAHLRD TIKERDERIA QLLHQITQMN
201: ELLVKITHSN
101: PWKSVIEIDI IQGWWKILLA RVMSNFQNLV TCFSRNSLCS FSKTLRSFYS VMVIFLWWWK RNRTRRRLEK GEIIAAHLRD TIKERDERIA QLLHQITQMN
201: ELLVKITHSN
Arabidopsis Description
At5g61360 [Source:UniProtKB/TrEMBL;Acc:Q9FLJ7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.