Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0512800-00 | Rice | cytosol | 38.48 | 59.31 |
| EES01101 | Sorghum | cytosol | 59.83 | 58.52 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:19.1.6.3 | Gene3D:2.60.40.790 | EntrezGene:8060825 | UniProt:C5XQ56 | InterPro:CS_dom |
| EnsemblPlants:EES00345 | ProteinID:EES00345 | ProteinID:EES00345.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:HSP20-like_chaperone | InterPro:IPR007052 | InterPro:IPR007699 | InterPro:IPR008978 | InterPro:IPR011990 | InterPro:IPR013026 |
| InterPro:IPR019734 | PFAM:PF04969 | PFAM:PF05002 | PFAM:PF14559 | PFscan:PS50005 | PFscan:PS50293 |
| PFscan:PS51048 | PFscan:PS51203 | PANTHER:PTHR22904 | PANTHER:PTHR22904:SF496 | InterPro:SGS_dom | SMART:SM00028 |
| EnsemblPlantsGene:SORBI_3003G077800 | SUPFAM:SSF48452 | SUPFAM:SSF49764 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat |
| UniParc:UPI0001A84780 | RefSeq:XP_002455225.1 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr3:+:6643506..6645842
Molecular Weight (calculated)
38386.3 Da
IEP (calculated)
6.416
GRAVY (calculated)
-0.378
Length
356 amino acids
Sequence
(BLAST)
(BLAST)
001: MATPCNELEH KAREAFVDDD FALAAALYTQ AIAAGPPTAA LYADRAQAYT KIGDFAAAAA DAARAVELDP AMARAHLRRA HACVKLEQYD AARAAVEAGA
101: ALSPGDARFA RLMKEIDGKA PKPMETDASP AVAVATAAPV PVPAPAEKPK YRHDFYNSAA EVVVTVFAKG VAPEHVAVEF GEQMLSVSVE VPGEAAYHLQ
201: PRLFGKIVPD KCRFAVLSTK IEVRLAKAEP GTTWTSLEFT DKPKFTAAAS PVASGGGGAQ RPCYPSSSSR GRKKDWDKVE AQVKKEEKEE KLDGDAAANR
301: FFQDIFGNAD EDMRRAMMKS FQESNGTVLS TDWKDVGSKK IEPSPPEGMH LRKWEY
101: ALSPGDARFA RLMKEIDGKA PKPMETDASP AVAVATAAPV PVPAPAEKPK YRHDFYNSAA EVVVTVFAKG VAPEHVAVEF GEQMLSVSVE VPGEAAYHLQ
201: PRLFGKIVPD KCRFAVLSTK IEVRLAKAEP GTTWTSLEFT DKPKFTAAAS PVASGGGGAQ RPCYPSSSSR GRKKDWDKVE AQVKKEEKEE KLDGDAAANR
301: FFQDIFGNAD EDMRRAMMKS FQESNGTVLS TDWKDVGSKK IEPSPPEGMH LRKWEY
001: MAKELAEKAK EAFLDDDFDV AVDLYSKAID LDPNCAAFFA DRAQANIKID NFTEAVVDAN KAIELEPTLA KAYLRKGTAC MKLEEYSTAK AALEKGASVA
101: PNEPKFKKMI DECDLRIAEE EKDLVQPMPP SLPSSSTTPL ATEADAPPVP IPAAPAKPMF RHEFYQKPEE AVVTIFAKKV PKENVTVEFG EQILSVVIDV
201: AGEEAYHLQP RLFGKIIPEK CRFEVLSTKV EIRLAKAEII TWASLEYGKG QSVLPKPNVS SALSQRPVYP SSKPAKDWDK LEAEVKKQEK DEKLDGDAAM
301: NKFFSDIYSS ADEDMRRAMN KSFAESNGTV LSTNWKEVGT KKVESTPPDG MELKKWEY
101: PNEPKFKKMI DECDLRIAEE EKDLVQPMPP SLPSSSTTPL ATEADAPPVP IPAAPAKPMF RHEFYQKPEE AVVTIFAKKV PKENVTVEFG EQILSVVIDV
201: AGEEAYHLQP RLFGKIIPEK CRFEVLSTKV EIRLAKAEII TWASLEYGKG QSVLPKPNVS SALSQRPVYP SSKPAKDWDK LEAEVKKQEK DEKLDGDAAM
301: NKFFSDIYSS ADEDMRRAMN KSFAESNGTV LSTNWKEVGT KKVESTPPDG MELKKWEY
Arabidopsis Description
SGT1BSGT1B [Source:UniProtKB/TrEMBL;Acc:A0A178UX37]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.