Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0624500-01 | Rice | cytosol, nucleus | 26.41 | 51.69 |
| EES00345 | Sorghum | cytosol | 59.31 | 38.48 |
Protein Annotations
| MapMan:19.1.6.3 | Gene3D:2.60.40.790 | UniProt:A0A0N7KD20 | ProteinID:BAS72393.1 | InterPro:CS_dom | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0005488 | InterPro:HSP20-like_chaperone | InterPro:IPR007052 | InterPro:IPR007699 | InterPro:IPR008978 |
| EnsemblPlantsGene:Os01g0512800 | EnsemblPlants:Os01t0512800-00 | PFAM:PF04969 | PFAM:PF05002 | PFscan:PS51048 | PFscan:PS51203 |
| PANTHER:PTHR22904 | PANTHER:PTHR22904:SF496 | InterPro:SGS_dom | SUPFAM:SSF49764 | UniParc:UPI000393AF7B | SEG:seg |
Description
CS-like domain domain containing protein. (Os01t0512800-00)
Coordinates
chr1:+:18077464..18078185
Molecular Weight (calculated)
25396.7 Da
IEP (calculated)
4.775
GRAVY (calculated)
-0.552
Length
231 amino acids
Sequence
(BLAST)
(BLAST)
001: MATSMELAPG DARFAKLAKE LDDKAPPKAA AAPPAASEDQ AAASSGKPKY KHDFYNGASE VVVTVFAKSV AAEHVSVDFG EQMLSVSVEV PGEAPYHLQP
101: RLSGASILPS KIEVRLAKAD EQVTWTSLEY TSKANNKLAA TATTTTRKKV DWDKLEAEVK KEEEEEEVDT ATPVVNRFFQ QMYGNGDEDM RRAIMKSYVE
201: SYVLSTDWKD VGSKKIEASA PEGMELHKWE Y
101: RLSGASILPS KIEVRLAKAD EQVTWTSLEY TSKANNKLAA TATTTTRKKV DWDKLEAEVK KEEEEEEVDT ATPVVNRFFQ QMYGNGDEDM RRAIMKSYVE
201: SYVLSTDWKD VGSKKIEASA PEGMELHKWE Y
001: MAKELADKAK EAFVDDDFDV AVDLYSKAID LDPNCAEFFA DRAQAYIKLE SFTEAVADAN KAIELDPSLT KAYLRKGTAC MKLEEYRTAK TALEKGASIT
101: PSESKFKKLI DECNFLITEE EKDLVQPVPS TLPSSVTAPP VSELDVTPTA KYRHEYYQKP EEVVVTVFAK GIPKQNVNID FGEQILSVVI EVPGEDAYYL
201: QPRLFGKIIP DKCKYEVLST KIEICLAKAD IITWASLEHG KGPAVLPKPN VSSEVSQRPA YPSSKKVKDW DKLEAEVKKQ EKDEKLEGDA ALNKFFREIY
301: QNADEDMRRA MSKSFVESNG TVLSTNWQEV GTKTIESTPP DGMELKKWEI
101: PSESKFKKLI DECNFLITEE EKDLVQPVPS TLPSSVTAPP VSELDVTPTA KYRHEYYQKP EEVVVTVFAK GIPKQNVNID FGEQILSVVI EVPGEDAYYL
201: QPRLFGKIIP DKCKYEVLST KIEICLAKAD IITWASLEHG KGPAVLPKPN VSSEVSQRPA YPSSKKVKDW DKLEAEVKKQ EKDEKLEGDA ALNKFFREIY
301: QNADEDMRRA MSKSFVESNG TVLSTNWQEV GTKTIESTPP DGMELKKWEI
Arabidopsis Description
SGT1Aphosphatase-related [Source:TAIR;Acc:AT4G23570]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.