Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d018256_P001 | Maize | nucleus | 77.04 | 75.62 |
| Os02t0776600-00 | Rice | cytosol, mitochondrion, nucleus, plastid | 64.15 | 67.33 |
| TraesCS6D01G315100.1 | Wheat | plastid | 54.09 | 48.18 |
| TraesCS6B01G366300.1 | Wheat | plastid | 53.46 | 47.62 |
Protein Annotations
| EnsemblPlants:EES07620 | EnsemblPlantsGene:SORBI_3004G316600 | ncoils:Coil | PANTHER:PTHR33541 | PANTHER:PTHR33541:SF4 | ProteinID:EES07620 |
| ProteinID:EES07620.2 | SEG:seg | UniParc:UPI0007F1B35A | UniProt:C5XTJ8 | MapMan:35.2 | : |
Description
hypothetical protein
Coordinates
chr4:-:65243167..65244756
Molecular Weight (calculated)
34257.3 Da
IEP (calculated)
11.535
GRAVY (calculated)
-0.834
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPHDDDGAR VPPPRPSRGH QPSFSAALLD AIYHSLEADG EARLSTEARR TRTPASSSSP ARRTPLPSRR RPTPEQSPSR SSVRSPRLQK TPRPCRVRPD
101: PQPILLPPPL PPPHPQESST GDRRAADAEK KRGRRKKSKG TAKAAPFACL LNALLCNRRP ARARSVDHTP RATAAASEPA SARSILSSRA SRMESAAAGG
201: ILTPARRAVR FSPVATVVGD DHGHLTAPTG LRDTGAEMAR ANKESAAEAE RKVEELLRAL GVADERDRAK ESSESSSDLF ELESLPAFED RDTEMRRSRT
301: AAGDGAGLLA RPRPRVAV
101: PQPILLPPPL PPPHPQESST GDRRAADAEK KRGRRKKSKG TAKAAPFACL LNALLCNRRP ARARSVDHTP RATAAASEPA SARSILSSRA SRMESAAAGG
201: ILTPARRAVR FSPVATVVGD DHGHLTAPTG LRDTGAEMAR ANKESAAEAE RKVEELLRAL GVADERDRAK ESSESSSDLF ELESLPAFED RDTEMRRSRT
301: AAGDGAGLLA RPRPRVAV
001: MEITWEKPKS SSHHRNPSFS STLLDQIYRS IDDSSPPPPL ESIKKKKHHH QQRNASLHED REISPIYHRR SIAADFERSR RKTDFLRHSN SSSSDSSGFS
101: SSESDSFHGR SKSSASPPSS SRQQPKPIRT SSVDHSSAVQ KPKELGGFLR TKSKALKIYS DLKKVKQPIS PGGRLATFLN SLFTNAATNP KKHKKTTTVA
201: VVEEPHSSST CSSASSFSRS CLSKTPSSSG KSKRSVRFCP VNVILDEDSS FTMPYAYNNE RLYDNNEAKR VEEHRRVIQA AKDLLRTYHN KNKVTTTNIN
301: NVEEDDEDDA ASCASSDLFE LENLSAIGIE RYREELPVYE TTRLDNMNRV IATGLIV
101: SSESDSFHGR SKSSASPPSS SRQQPKPIRT SSVDHSSAVQ KPKELGGFLR TKSKALKIYS DLKKVKQPIS PGGRLATFLN SLFTNAATNP KKHKKTTTVA
201: VVEEPHSSST CSSASSFSRS CLSKTPSSSG KSKRSVRFCP VNVILDEDSS FTMPYAYNNE RLYDNNEAKR VEEHRRVIQA AKDLLRTYHN KNKVTTTNIN
301: NVEEDDEDDA ASCASSDLFE LENLSAIGIE RYREELPVYE TTRLDNMNRV IATGLIV
Arabidopsis Description
Protein BIG GRAIN 1-like A [Source:UniProtKB/Swiss-Prot;Acc:Q9LVK2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.