Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 1
- plastid 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES07620 | Sorghum | nucleus | 75.62 | 77.04 |
| Os02t0776600-00 | Rice | cytosol, mitochondrion, nucleus, plastid | 59.88 | 64.03 |
| TraesCS6B01G366300.1 | Wheat | plastid | 52.16 | 47.34 |
| TraesCS6D01G315100.1 | Wheat | plastid | 51.85 | 47.06 |
Protein Annotations
| EnsemblPlants:Zm00001d018256_P001 | EnsemblPlants:Zm00001d018256_T001 | EnsemblPlantsGene:Zm00001d018256 | EntrezGene:103627809 | ncoils:Coil | PANTHER:PTHR33541 |
| PANTHER:PTHR33541:SF4 | ProteinID:AQK75362.1 | SEG:seg | UniParc:UPI000220E296 | UniProt:A0A1D6HLV4 | MapMan:35.2 |
Description
No Description!
Coordinates
chr5:-:217507589..217508563
Molecular Weight (calculated)
34565.5 Da
IEP (calculated)
11.928
GRAVY (calculated)
-0.828
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPHDGARAP PPRPSRGHQP SFSAALLDAI YHSLEADAEA RTSTEARRTR TPASSPAQLP SRRRPTPELS PSPSPSRSSV RSPRLQRAPR PCRVRPDPQP
101: NSSGSLLLPP PLPPHPHEHE PSSTGHRRVA DAERKRGRGR KSKRTAPFAC LLNALLCNRR PARPVDRTPR ATATPTPTPA TAAPEPASAR SILSSRASRS
201: RRESAAAGGV LAPARRAVRF SPVATVVGDG HGHGAGSVGT ATTGLRAKES AAEAERRVEE LLRALGVADE RERAKESTES SSDLFELDSL PAFQDRGTDL
301: PRSRTVADGD DGAGLLARPR PRVQ
101: NSSGSLLLPP PLPPHPHEHE PSSTGHRRVA DAERKRGRGR KSKRTAPFAC LLNALLCNRR PARPVDRTPR ATATPTPTPA TAAPEPASAR SILSSRASRS
201: RRESAAAGGV LAPARRAVRF SPVATVVGDG HGHGAGSVGT ATTGLRAKES AAEAERRVEE LLRALGVADE RERAKESTES SSDLFELDSL PAFQDRGTDL
301: PRSRTVADGD DGAGLLARPR PRVQ
001: MDPWDTYNIP LDHQHRLRNR RDHRHPSFSS TLLDQIYRSI DDSSTNSSSM RKTKHQNRED TRVSANRRDD FNRSKNLKTI EPVFFKHSSS SSSDSSGFSS
101: SESDYFYRRS KSSPAISHPK PIRTTVERFE RSPQNHRPNS SNKQEHGSFL KTKSKALKIY SDLKKVKQPI SPGGRLATFL NSIFTGAGNT KKLNKINTTV
201: TSTTAAAAAA SSTTTCSSAS SFSRSCLSKT PSSSEKSKRS VRFCPVNVIF DEDSSKYNNK NNKVYGNNER EYESIRHTLE NRVMEENRRV IEAAKELLRS
301: YQKKNKEVIE VSVEDDEEDD DDDALSCTSS DLFELDNLSA IGIDRYREEL PVYETTRLNT NRIISR
101: SESDYFYRRS KSSPAISHPK PIRTTVERFE RSPQNHRPNS SNKQEHGSFL KTKSKALKIY SDLKKVKQPI SPGGRLATFL NSIFTGAGNT KKLNKINTTV
201: TSTTAAAAAA SSTTTCSSAS SFSRSCLSKT PSSSEKSKRS VRFCPVNVIF DEDSSKYNNK NNKVYGNNER EYESIRHTLE NRVMEENRRV IEAAKELLRS
301: YQKKNKEVIE VSVEDDEEDD DDDALSCTSS DLFELDNLSA IGIDRYREEL PVYETTRLNT NRIISR
Arabidopsis Description
Protein BIG GRAIN 1-like B [Source:UniProtKB/Swiss-Prot;Acc:Q9SLL2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.