Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- vacuole 1
- mitochondrion 3
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES07620 | Sorghum | nucleus | 67.33 | 64.15 |
| Zm00001d018256_P001 | Maize | nucleus | 64.03 | 59.88 |
| TraesCS6B01G366300.1 | Wheat | plastid | 61.39 | 52.1 |
| TraesCS6D01G315100.1 | Wheat | plastid | 60.4 | 51.26 |
Protein Annotations
| EnsemblPlants:Os02t0776600-00 | EnsemblPlantsGene:Os02g0776600 | ncoils:Coil | PANTHER:PTHR33541 | PANTHER:PTHR33541:SF4 | ProteinID:BAH91895.1 |
| ProteinID:BAS81170.1 | SEG:seg | UniParc:UPI0001B6613F | UniProt:C7IZ49 | MapMan:35.2 | : |
Description
Hypothetical conserved gene. (Os02t0776600-00)
Coordinates
chr2:-:32822838..32823749
Molecular Weight (calculated)
32160.0 Da
IEP (calculated)
10.943
GRAVY (calculated)
-0.566
Length
303 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPHHSGRLA PPRRNRENPS FSAALLDAIY HSLDADGSLP ASPADAEGSP VPGRRRRPSQ CNNLSPSASS VRSPRLQKTP RPCRVRPDPQ PSLLLPPPQP
101: PPPMPESTGD VAEKKRGRRK NKNGAKSAPF ACLLNALLCN RRSARSAEPT TPRALAVAPA AVAVTAAEPA SARSILSSRA SRRQPAATGG ILTPARRAVR
201: FSPVAVVVDD GEHGCRDAGV ARLRGAEREV AAAQESAAEA ERRVEELLRA LGVAEESERA KESSESSSDL FELESLPAFD DAELPRPRAA AGLVLARPRP
301: RVC
101: PPPMPESTGD VAEKKRGRRK NKNGAKSAPF ACLLNALLCN RRSARSAEPT TPRALAVAPA AVAVTAAEPA SARSILSSRA SRRQPAATGG ILTPARRAVR
201: FSPVAVVVDD GEHGCRDAGV ARLRGAEREV AAAQESAAEA ERRVEELLRA LGVAEESERA KESSESSSDL FELESLPAFD DAELPRPRAA AGLVLARPRP
301: RVC
001: MEITWEKPKS SSHHRNPSFS STLLDQIYRS IDDSSPPPPL ESIKKKKHHH QQRNASLHED REISPIYHRR SIAADFERSR RKTDFLRHSN SSSSDSSGFS
101: SSESDSFHGR SKSSASPPSS SRQQPKPIRT SSVDHSSAVQ KPKELGGFLR TKSKALKIYS DLKKVKQPIS PGGRLATFLN SLFTNAATNP KKHKKTTTVA
201: VVEEPHSSST CSSASSFSRS CLSKTPSSSG KSKRSVRFCP VNVILDEDSS FTMPYAYNNE RLYDNNEAKR VEEHRRVIQA AKDLLRTYHN KNKVTTTNIN
301: NVEEDDEDDA ASCASSDLFE LENLSAIGIE RYREELPVYE TTRLDNMNRV IATGLIV
101: SSESDSFHGR SKSSASPPSS SRQQPKPIRT SSVDHSSAVQ KPKELGGFLR TKSKALKIYS DLKKVKQPIS PGGRLATFLN SLFTNAATNP KKHKKTTTVA
201: VVEEPHSSST CSSASSFSRS CLSKTPSSSG KSKRSVRFCP VNVILDEDSS FTMPYAYNNE RLYDNNEAKR VEEHRRVIQA AKDLLRTYHN KNKVTTTNIN
301: NVEEDDEDDA ASCASSDLFE LENLSAIGIE RYREELPVYE TTRLDNMNRV IATGLIV
Arabidopsis Description
Protein BIG GRAIN 1-like A [Source:UniProtKB/Swiss-Prot;Acc:Q9LVK2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.