Factsheet for GSMUA_Achr1P02880_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P25420_001	Banana	cytosol	85.67	74.93
VIT_01s0010g01730.t01	Wine grape	cytosol	54.03	65.82
GSMUA_Achr10P...	Banana	cytosol	39.7	41.05
GSMUA_Achr5P28750_001	Banana	golgi, mitochondrion, peroxisome, plastid	40.6	39.08
GSMUA_Achr7P12390_001	Banana	cytosol	36.72	38.68
GSMUA_Achr9P15760_001	Banana	cytosol, nucleus, peroxisome, plastid	35.22	36.53
GSMUA_Achr11P...	Banana	cytosol	34.63	36.25
GSMUA_Achr1P22080_001	Banana	cytosol, peroxisome	27.46	35.8
GSMUA_Achr9P24380_001	Banana	endoplasmic reticulum	35.22	34.91
GSMUA_Achr1P22090_001	Banana	mitochondrion	33.13	34.91
GSMUA_Achr3P07660_001	Banana	plastid	32.24	33.13
GSMUA_Achr9P15770_001	Banana	cytosol, golgi, peroxisome, plastid	35.22	31.89
GSMUA_Achr3P07670_001	Banana	mitochondrion, plastid	32.24	30.86
GSMUA_Achr8P16620_001	Banana	mitochondrion	29.85	13.09
GSMUA_Achr1P22070_001	Banana	nucleus, peroxisome	25.37	12.21
GSMUA_Achr8P16660_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	30.75	9.36

Protein Annotations

Gene3D:3.20.20.100	MapMan:50.1.1	InterPro:Aldo/ket_reductase_CS	InterPro:Aldo/keto_reductase	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr1G02880_001	EnsemblPlants:GSMUA_Achr1P02880_001
EnsemblPlants:GSMUA_Achr1T02880_001	InterPro:IPR036812	UniProt:M0RWJ6	InterPro:NADP_OxRdtase_dom	InterPro:NADP_OxRdtase_dom_sf	PFAM:PF00248
PIRSF:PIRSF000097	PRINTS:PR00069	ScanProsite:PS00062	PANTHER:PTHR11732	PANTHER:PTHR11732:SF368	SUPFAM:SSF51430
UniParc:UPI000294D118	:	:	:	:	:

Description

Putative Alcohol dehydrogenase [NADP+] A [Source:GMGC_GENE;Acc:GSMUA_Achr1G02880_001]

Coordinates

chr1:+:2337506..2343471

Molecular Weight (calculated)

37317.7 Da

IEP (calculated)

7.236

GRAVY (calculated)

-0.216

Length

335 amino acids

Sequence
(BLAST)

001: MKGKGATAKN YFVLNTGAKI PAVGLATWQH GGDLCAEAVA TALTAGYRHI DCTHLYGNEV EVGKALAEAF ESGAKREDLF LTSKLYCATN SHKRVENSVR
101: VSLKSLGVSY LDLYLVHWPE CSALGDATDP SWKSASEYRQ FSQRLKPTWE AMESLVRMGL VRAIGVSNFN IQQISELLQF AKIVPAVNQV ELHPFWRQDE
201: LVKFCQQKRI HVSAQTPLGV PISRGMATAM HGPMMKLSVV VDIAERHNKT PEQVILRWGL QRGTSLLPCS LNPDRIRKNI DIFSWSLTDE EWNRMNRIEP
301: QICLFGSGPV NTSETGFFSA AGPLQAVYEM EDDTE

Best Arabidopsis Sequence Match ( AT2G37770.2 )
(BLAST)

001: MANAITFFKL NTGAKFPSVG LGTWQASPGL VGDAVAAAVK IGYRHIDCAQ IYGNEKEIGA VLKKLFEDRV VKREDLFITS KLWCTDHDPQ DVPEALNRTL
101: KDLQLEYVDL YLIHWPARIK KGSVGIKPEN LLPVDIPSTW KAMEALYDSG KARAIGVSNF STKKLADLLE LARVPPAVNQ VECHPSWRQT KLQEFCKSKG
201: VHLSAYSPLG SPGTTWLKSD VLKNPILNMV AEKLGKSPAQ VALRWGLQMG HSVLPKSTNE GRIKENFNVF DWSIPDYMFA KFAEIEQARL VTGSFLVHET
301: LSPYKSIEEL WDGEI

Arabidopsis Description

AKR4C9NADPH-dependent aldo-keto reductase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q0PGJ6]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.