Factsheet for GSMUA_Achr1P22090_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 3
plastid 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P22080_001	Banana	cytosol, peroxisome	66.04	81.71
Solyc03g098100.2.1	Tomato	plastid	34.91	56.92
VIT_05s0077g02190.t01	Wine grape	cytosol	56.6	56.6
VIT_05s0077g02180.t01	Wine grape	cytosol, peroxisome, plastid	34.91	56.35
KRH09512	Soybean	cytosol	55.66	55.31
KRH38984	Soybean	cytosol	55.03	55.03
VIT_18s0001g09570.t01	Wine grape	cytosol, nucleus, peroxisome	55.66	54.97
VIT_05s0077g02150.t01	Wine grape	cytosol	52.52	54.93
PGSC0003DMT400079684	Potato	cytosol	53.77	54.63
GSMUA_Achr9P15760_001	Banana	cytosol, nucleus, peroxisome, plastid	55.35	54.49
GSMUA_Achr7P12390_001	Banana	cytosol	53.77	53.77
PGSC0003DMT400047408	Potato	cytosol	54.4	53.4
KRH38981	Soybean	cytosol	52.2	53.38
KRH09516	Soybean	cytosol	46.86	53.21
GSMUA_Achr11P...	Banana	cytosol	53.14	52.81
KRH09515	Soybean	cytosol	53.46	52.8
Solyc12g042470.1.1	Tomato	plastid	52.52	50.45
GSMUA_Achr3P07660_001	Banana	plastid	50.63	49.39
GSMUA_Achr9P15770_001	Banana	cytosol, golgi, peroxisome, plastid	52.2	44.86
GSMUA_Achr3P07670_001	Banana	mitochondrion, plastid	49.37	44.86
GSMUA_Achr10P...	Banana	cytosol	40.57	39.81
GSMUA_Achr5P28750_001	Banana	golgi, mitochondrion, peroxisome, plastid	41.51	37.93
GSMUA_Achr9P24380_001	Banana	endoplasmic reticulum	35.22	33.14
GSMUA_Achr1P02880_001	Banana	cytosol	34.91	33.13
GSMUA_Achr4P25420_001	Banana	cytosol	35.85	29.77
GSMUA_Achr1P22070_001	Banana	nucleus, peroxisome	63.21	28.88
GSMUA_Achr8P16620_001	Banana	mitochondrion	46.23	19.24
GSMUA_Achr8P16660_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	47.17	13.62

Protein Annotations

Gene3D:3.20.20.100	MapMan:50.1.1	InterPro:Aldo/ket_reductase_CS	InterPro:Aldo/keto_reductase	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr1G22090_001	EnsemblPlants:GSMUA_Achr1P22090_001
EnsemblPlants:GSMUA_Achr1T22090_001	InterPro:IPR036812	UniProt:M0S217	InterPro:NADP_OxRdtase_dom	InterPro:NADP_OxRdtase_dom_sf	PFAM:PF00248
PIRSF:PIRSF000097	PRINTS:PR00069	ScanProsite:PS00062	ScanProsite:PS00063	ScanProsite:PS00798	PANTHER:PTHR11732
PANTHER:PTHR11732:SF239	SUPFAM:SSF51430	UniParc:UPI0002957161	:	:	:

Description

Probable NAD(P)H-dependent oxidoreductase 1 [Source:GMGC_GENE;Acc:GSMUA_Achr1G22090_001]

Coordinates

chr1:+:16615641..16617850

Molecular Weight (calculated)

35847.5 Da

IEP (calculated)

6.715

GRAVY (calculated)

-0.102

Length

318 amino acids

Sequence
(BLAST)

001: MAVMQQVVLS SGRRMPVLGM GTATYPVPPD EIMTSAVIDA IELGYRHFDT ASIYGSERAV GQAIATALER GLIRSRDELF VTTKLWCTDM HADRVVPALQ
101: ESLRTLGLEY IDLYLIHFPV RLKGDKQIIF TSEDMIPLDM PTVWEAMEKC QSLGLAKSIG VSNFTCRKLA DLLSHAKIPP AVNQVEINPI WQQRKLRDFC
201: SEKGIHVTAY SLLGAIGVFW GSNDVLECEE VKRIAQSTGK SRAQVCLRWG VEQGGSIVVK SFNKERLKEN MEIFDWHLKE EDKERLSLVP QKRLILVHPF
301: ISPNGLYKSH AEFWDGDV

Best Arabidopsis Sequence Match ( AT1G59960.1 )
(BLAST)

001: MSLTTVPTLA IRSGPSGHHS MPVLGFGTAA SPLPEPTMLK ETVIEAIKLG YRHFDTSPRY QTEEPIGEAL AEAVSLGLVR SRSEFFVTTK LWCADAHGGL
101: VVPAIKRSLK NLKLDYLDLY IIHWPVSSKP GKYKFPIDED DFMPMDFEVV WSEMEECQRL GLAKCIGVSN FSCKKLQHIL SIATIPPSVN QVEMSPIWQQ
201: RKLRELCRSN DIVVTAYSVL GSRGAFWGTP KIMESDVLKE IAEAKEKTVA QVSMRWAYEQ GVSMVVKSFT KERLEENLKI FDWSLTEDET QRISTEIPQF
301: RNVHGEVYTS KKGPIKSVAE MWDGEI

Arabidopsis Description

NAD(P)-linked oxidoreductase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SXC0]
SUBAcon: [mitochondrion,peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.