Factsheet for Solyc03g098100.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 5
peroxisome 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plastid: 22908117

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400079684	Potato	cytosol	87.69	54.63
VIT_05s0077g02180.t01	Wine grape	cytosol, peroxisome, plastid	43.59	43.15
GSMUA_Achr1P22080_001	Banana	cytosol, peroxisome	55.38	42.02
VIT_18s0001g09570.t01	Wine grape	cytosol, nucleus, peroxisome	67.69	40.99
VIT_05s0077g02190.t01	Wine grape	cytosol	66.67	40.88
KRH09512	Soybean	cytosol	64.1	39.06
Solyc12g042470.1.1	Tomato	plastid	65.64	38.67
VIT_05s0077g02150.t01	Wine grape	cytosol	59.49	38.16
KRH38981	Soybean	cytosol	60.0	37.62
KRH09515	Soybean	cytosol	60.51	36.65
KRH38984	Soybean	cytosol	56.92	34.91
GSMUA_Achr1P22090_001	Banana	mitochondrion	56.92	34.91
KRH09516	Soybean	cytosol	48.72	33.93
Solyc04g008440.1.1	Tomato	plastid	51.79	31.86
Solyc09g011240.2.1	Tomato	extracellular, unclear	46.67	28.71
Solyc03g093280.1.1	Tomato	cytosol	42.05	26.03
Solyc03g093270.2.1	Tomato	cytoskeleton, cytosol, peroxisome	40.51	25.08
Solyc09g015070.2.1	Tomato	cytosol	40.51	24.76
Solyc01g110450.2.1	Tomato	extracellular	38.46	24.27
Solyc03g093290.2.1	Tomato	cytosol	34.87	23.37
GSMUA_Achr1P22070_001	Banana	nucleus, peroxisome	55.38	15.52

Protein Annotations

Gene3D:3.20.20.100	MapMan:50.1.1	InterPro:Aldo/ket_reductase_CS	InterPro:Aldo/keto_reductase	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPR036812	UniProt:K4BJM5
InterPro:NADP_OxRdtase_dom	InterPro:NADP_OxRdtase_dom_sf	PFAM:PF00248	PRINTS:PR00069	ScanProsite:PS00062	ScanProsite:PS00798
PANTHER:PTHR11732	PANTHER:PTHR11732:SF239	SUPFAM:SSF51430	EnsemblPlantsGene:Solyc03g098100.2	EnsemblPlants:Solyc03g098100.2.1	UniParc:UPI000276876E

Description

No Description!

Coordinates

chr3:+:60441585..60442874

Molecular Weight (calculated)

21618.7 Da

IEP (calculated)

6.107

GRAVY (calculated)

0.184

Length

195 amino acids

Sequence
(BLAST)

001: MEETMHVPEV VLNCGYKMPL LGMGTAAYPM PIDDLTSILV EAIETGYRHF DTAALYGSEE AVGRAVAEAI DRGIIKSRQQ VFITSKLWCT QAHPQFVLPA
101: LKNTLGKLGL EYVDLYLIHW PVSMKPGPVD MLKFKKEDIV PFDMKGVWKA MEECCRLGLA KSIGVSNFSC TKLSQLLQIA NIPPAVNQVS IVDIF

Best Arabidopsis Sequence Match ( AT2G37770.1 )
(BLAST)

001: MANAITFFKL NTGAKFPSVG LGTWQASPGL VGDAVAAAVK IGYRHIDCAQ IYGNEKEIGA VLKKLFEDRV VKREDLFITS KLWCTDHDPQ DVPEALNRTL
101: KDLQLEYVDL YLIHWPARIK KGSVGIKPEN LLPVDIPSTW KAMEALYDSG KARAIGVSNF STKKLADLLE LARVPPAVNQ VECHPSWRQT KLQEFCKSKG
201: VHLSVSITRL TNPFTFYFIH SLNDFFFPGI LAIRFSRDNM AEERCFEEPD TEYGCGKTRK ESCASRPSLG TPNGSQCASQ EYK

Arabidopsis Description

AKR4C9NADPH-dependent aldo-keto reductase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q0PGJ6]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.