Factsheet for PGSC0003DMT400079684

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 2
peroxisome 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g098100.2.1	Tomato	plastid	54.63	87.69
PGSC0003DMT400047408	Potato	cytosol	67.09	64.81
KRH09512	Soybean	cytosol	63.26	61.88
VIT_05s0077g02190.t01	Wine grape	cytosol	62.62	61.64
VIT_18s0001g09570.t01	Wine grape	cytosol, nucleus, peroxisome	62.94	61.18
KRH38981	Soybean	cytosol	60.06	60.45
VIT_05s0077g02150.t01	Wine grape	cytosol	58.15	59.87
KRH09516	Soybean	cytosol	50.8	56.79
KRH38984	Soybean	cytosol	57.51	56.6
VIT_05s0077g02180.t01	Wine grape	cytosol, peroxisome, plastid	35.46	56.35
KRH09515	Soybean	cytosol	57.19	55.59
GSMUA_Achr1P22080_001	Banana	cytosol, peroxisome	44.41	54.09
GSMUA_Achr1P22090_001	Banana	mitochondrion	54.63	53.77
PGSC0003DMT400058309	Potato	cytosol	55.27	53.07
PGSC0003DMT400089951	Potato	cytoskeleton, cytosol, peroxisome	43.45	43.17
PGSC0003DMT400091735	Potato	cytoskeleton, cytosol, peroxisome	43.45	43.17
PGSC0003DMT400030366	Potato	cytosol	43.45	42.63
PGSC0003DMT400092283	Potato	cytosol	30.67	42.48
PGSC0003DMT400038402	Potato	cytoskeleton, cytosol, peroxisome	42.49	42.22
PGSC0003DMT400022952	Potato	cytosol	41.85	41.32
PGSC0003DMT400087169	Potato	cytosol, peroxisome, plastid	30.35	41.13
PGSC0003DMT400022949	Potato	cytosol, peroxisome, plastid	41.53	40.37
PGSC0003DMT400004180	Potato	cytosol, peroxisome, plastid	35.46	35.92
GSMUA_Achr1P22070_001	Banana	nucleus, peroxisome	41.21	18.53

Protein Annotations

Gene3D:3.20.20.100	MapMan:50.1.1	InterPro:Aldo/ket_reductase_CS	InterPro:Aldo/keto_reductase	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPR036812	UniProt:M1D2A4
InterPro:NADP_OxRdtase_dom	InterPro:NADP_OxRdtase_dom_sf	PFAM:PF00248	EnsemblPlantsGene:PGSC0003DMG401031036	PGSC:PGSC0003DMG401031036	EnsemblPlants:PGSC0003DMT400079684
PIRSF:PIRSF000097	PRINTS:PR00069	ScanProsite:PS00062	ScanProsite:PS00063	ScanProsite:PS00798	PFscan:PS51257
PANTHER:PTHR11732	PANTHER:PTHR11732:SF239	SUPFAM:SSF51430	UniParc:UPI000296E9F5	:	:

Description

Chalcone reductase [Source:PGSC_GENE;Acc:PGSC0003DMG401031036]

Coordinates

chr3:-:45103421..45107315

Molecular Weight (calculated)

35054.4 Da

IEP (calculated)

6.622

GRAVY (calculated)

-0.171

Length

313 amino acids

Sequence
(BLAST)

001: MEKVVHVPEV VLNSGYKMPL LGMGTAACPM PIDDLTSILV DAMETGYRHF DTAALYGSEE AVGRAVAEAI ERGITKSRQQ VFITSKLWCT DAHPQLVLPA
101: LKNTLGKLGL DCVDLYLIHW PISMKPGPVD ILKFKKEDVV PFDMKGVWQA MEECCKLGLA KSIGVSNFSC TKLSHLLQIA TIRPAVNQVE INVAWQQRKV
201: LEYCKEKGIH VSAYSPLGAS WNSPIINDIA TTKQKSIPQV ALRWIYEQGA SVIVKSFNKE RMKQNLEIFD WELSTEDNFK IQDIPQKKGY NGEDFTHPNG
301: PYKSVNDIWD GEI

Best Arabidopsis Sequence Match ( AT1G59960.1 )
(BLAST)

001: MSLTTVPTLA IRSGPSGHHS MPVLGFGTAA SPLPEPTMLK ETVIEAIKLG YRHFDTSPRY QTEEPIGEAL AEAVSLGLVR SRSEFFVTTK LWCADAHGGL
101: VVPAIKRSLK NLKLDYLDLY IIHWPVSSKP GKYKFPIDED DFMPMDFEVV WSEMEECQRL GLAKCIGVSN FSCKKLQHIL SIATIPPSVN QVEMSPIWQQ
201: RKLRELCRSN DIVVTAYSVL GSRGAFWGTP KIMESDVLKE IAEAKEKTVA QVSMRWAYEQ GVSMVVKSFT KERLEENLKI FDWSLTEDET QRISTEIPQF
301: RNVHGEVYTS KKGPIKSVAE MWDGEI

Arabidopsis Description

NAD(P)-linked oxidoreductase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SXC0]
SUBAcon: [mitochondrion,peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.