Factsheet for PGSC0003DMT400087169

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 4
mitochondrion 3
peroxisome 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400092283	Potato	cytosol	64.07	65.49
Solyc04g008440.1.1	Tomato	plastid	76.19	55.52
VIT_01s0011g06500.t01	Wine grape	extracellular	56.28	41.14
GSMUA_Achr9P15760_001	Banana	cytosol, nucleus, peroxisome, plastid	43.29	30.96
PGSC0003DMT400079684	Potato	cytosol	41.13	30.35
AT1G59950.1	Thale cress	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	41.99	30.31
CDY44475	Canola	cytosol, nucleus, peroxisome	33.77	30.23
PGSC0003DMT400058309	Potato	cytosol	42.42	30.06
AT1G59960.1	Thale cress	cytosol, mitochondrion, peroxisome, plastid	41.56	29.45
GSMUA_Achr3P07660_001	Banana	plastid	41.56	29.45
CDY30914	Canola	cytosol	41.56	29.36
CDX79850	Canola	cytosol	41.13	29.23
PGSC0003DMT400047408	Potato	cytosol	40.26	28.7
Bra027828.1-P	Field mustard	cytosol	42.42	26.7
GSMUA_Achr9P15770_001	Banana	cytosol, golgi, peroxisome, plastid	41.99	26.22
GSMUA_Achr3P07670_001	Banana	mitochondrion, plastid	39.39	26.0
PGSC0003DMT400022952	Potato	cytosol	34.2	24.92
PGSC0003DMT400022949	Potato	cytosol, peroxisome, plastid	34.2	24.53
PGSC0003DMT400038402	Potato	cytoskeleton, cytosol, peroxisome	33.33	24.44
PGSC0003DMT400004180	Potato	cytosol, peroxisome, plastid	32.47	24.27
PGSC0003DMT400030366	Potato	cytosol	32.9	23.82
PGSC0003DMT400091735	Potato	cytoskeleton, cytosol, peroxisome	32.47	23.81
PGSC0003DMT400089951	Potato	cytoskeleton, cytosol, peroxisome	32.03	23.49

Protein Annotations

Gene3D:3.20.20.100	MapMan:50.1.1	InterPro:Aldo/ket_reductase_CS	InterPro:Aldo/keto_reductase	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPR036812	UniProt:M1DDA5
InterPro:NADP_OxRdtase_dom	InterPro:NADP_OxRdtase_dom_sf	PFAM:PF00248	EnsemblPlantsGene:PGSC0003DMG400036740	PGSC:PGSC0003DMG400036740	EnsemblPlants:PGSC0003DMT400087169
PIRSF:PIRSF000097	PRINTS:PR00069	ScanProsite:PS00062	PANTHER:PTHR11732	PANTHER:PTHR11732:SF369	SUPFAM:SSF51430
UniParc:UPI000294A84D	:	:	:	:	:

Description

D-galacturonic acid reductase 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400036740]

Coordinates

chr4:+:3370892..3373514

Molecular Weight (calculated)

26056.9 Da

IEP (calculated)

8.286

GRAVY (calculated)

-0.112

Length

231 amino acids

Sequence
(BLAST)

001: MQQVTLKNCD KPMPAIGMGT VLSSRPGADP SETMKSTLLE AIKAGYRHFD TTFIYQSKKP LGGAIVEAIH LGFVKSRDEL FITTKLWCTF AQRDQIVGAC
101: KLSLRELQLE YVDMYLIHHP LRVSETIQKF PVPKEIIHPL DIKGVWEGME ECKNLGLTKG IGVSNFSRKK LEELLSVTKI PPAVNQSNTF TVLTVEDELC
201: KGSKNQFLIH RFICIIRIHY RSELGAEFCG E

Best Arabidopsis Sequence Match ( AT1G59950.1 )
(BLAST)

001: MSALTFPIGS VHHLMPVLAL GTAASPPPEP IVLKRTVLEA IKLGYRHFDT SPRYQTEEPL GEALAEAVSL GLIQSRSELF VTSKLWCADA HGGLVVPAIQ
101: RSLETLKLDY LDLYLIHWPV SSKPGKYKFP IEEDDFLPMD YETVWSEMEE CQRLGVAKCI GVSNFSCKKL QHILSIAKIP PSVNQVEMSP VWQQRKLREL
201: CKSKGIVVTA YSVLGSRGAF WGTHKIMESD VLKEIAEAKG KTVAQVSMRW AYEEGVSMVV KSFRKDRLEE NLKIFDWSLT EEEKQRISTE ISQSRIVDGE
301: VYISEKGPIK SVTEMWDGEI

Arabidopsis Description

Aldo/keto reductase [Source:UniProtKB/TrEMBL;Acc:Q1PFI5]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.