Factsheet for PGSC0003DMT400092283

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 2
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400087169	Potato	cytosol, peroxisome, plastid	65.49	64.07
Solyc04g008440.1.1	Tomato	plastid	87.61	62.46
VIT_01s0011g06500.t01	Wine grape	extracellular	66.81	47.78
GSMUA_Achr9P15760_001	Banana	cytosol, nucleus, peroxisome, plastid	50.44	35.29
GSMUA_Achr3P07660_001	Banana	plastid	50.44	34.97
PGSC0003DMT400058309	Potato	cytosol	49.12	34.05
AT1G59950.1	Thale cress	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	46.9	33.12
CDY30914	Canola	cytosol	46.46	32.11
GSMUA_Achr3P07670_001	Banana	mitochondrion, plastid	48.67	31.43
CDX79850	Canola	cytosol	45.13	31.38
AT1G59960.1	Thale cress	cytosol, mitochondrion, peroxisome, plastid	45.13	31.29
PGSC0003DMT400079684	Potato	cytosol	42.48	30.67
PGSC0003DMT400047408	Potato	cytosol	42.48	29.63
GSMUA_Achr9P15770_001	Banana	cytosol, golgi, peroxisome, plastid	48.23	29.46
CDY44475	Canola	cytosol, nucleus, peroxisome	33.63	29.46
PGSC0003DMT400022952	Potato	cytosol	40.27	28.71
Bra027828.1-P	Field mustard	cytosol	46.46	28.61
PGSC0003DMT400038402	Potato	cytoskeleton, cytosol, peroxisome	39.82	28.57
PGSC0003DMT400022949	Potato	cytosol, peroxisome, plastid	39.82	27.95
PGSC0003DMT400091735	Potato	cytoskeleton, cytosol, peroxisome	38.5	27.62
PGSC0003DMT400089951	Potato	cytoskeleton, cytosol, peroxisome	38.05	27.3
PGSC0003DMT400030366	Potato	cytosol	33.19	23.51
PGSC0003DMT400004180	Potato	cytosol, peroxisome, plastid	30.53	22.33

Protein Annotations

Gene3D:3.20.20.100	MapMan:35.1	InterPro:Aldo/ket_reductase_CS	InterPro:Aldo/keto_reductase	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPR036812	UniProt:M1DPH1
InterPro:NADP_OxRdtase_dom	InterPro:NADP_OxRdtase_dom_sf	PFAM:PF00248	EnsemblPlantsGene:PGSC0003DMG400041854	PGSC:PGSC0003DMG400041854	EnsemblPlants:PGSC0003DMT400092283
PIRSF:PIRSF000097	PRINTS:PR00069	ScanProsite:PS00062	ScanProsite:PS00798	PANTHER:PTHR11732	PANTHER:PTHR11732:SF369
SUPFAM:SSF51430	UniParc:UPI000294F4BF	:	:	:	:

Description

D-galacturonic acid reductase 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400041854]

Coordinates

chr4:+:3382673..3384425

Molecular Weight (calculated)

25195.6 Da

IEP (calculated)

5.896

GRAVY (calculated)

-0.172

Length

226 amino acids

Sequence
(BLAST)

001: MQQVILNNCD KAMPAIGMET VLSSRPGADP LETMKSALLE AIKAGYRHFD TAFIYQSEKP LGESIVEALH LVMDISHGVG GEDRELQLEY VDMYLIHHPL
101: RVSETIQKLP VPKEIIHALD IKGVWEGMEE CKNLGLTKGI GVSNFSCKKL EELLSVAKIP PAVNQVEMNP IWQQKELREF CNAKGIHITA YSPLGAYNTI
201: WGDNRVMECD VLTQIAKSKG KTTAQY

Best Arabidopsis Sequence Match ( AT1G59950.1 )
(BLAST)

001: MSALTFPIGS VHHLMPVLAL GTAASPPPEP IVLKRTVLEA IKLGYRHFDT SPRYQTEEPL GEALAEAVSL GLIQSRSELF VTSKLWCADA HGGLVVPAIQ
101: RSLETLKLDY LDLYLIHWPV SSKPGKYKFP IEEDDFLPMD YETVWSEMEE CQRLGVAKCI GVSNFSCKKL QHILSIAKIP PSVNQVEMSP VWQQRKLREL
201: CKSKGIVVTA YSVLGSRGAF WGTHKIMESD VLKEIAEAKG KTVAQVSMRW AYEEGVSMVV KSFRKDRLEE NLKIFDWSLT EEEKQRISTE ISQSRIVDGE
301: VYISEKGPIK SVTEMWDGEI

Arabidopsis Description

Aldo/keto reductase [Source:UniProtKB/TrEMBL;Acc:Q1PFI5]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.