Factsheet for PGSC0003DMT400058309

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 3
peroxisome 2
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400079684	Potato	cytosol	53.07	55.27
KXG26407	Sorghum	plastid	55.21	54.38
TraesCS2D01G313700.1	Wheat	cytosol	53.37	53.37
TraesCS2A01G315500.1	Wheat	cytosol	29.75	53.3
TraesCS2A01G315600.1	Wheat	cytosol	53.37	53.21
Zm00001d025533_P001	Maize	cytosol	53.37	52.57
Os04t0447600-01	Rice	cytosol	51.84	52.32
TraesCS2A01G315700.1	Wheat	cytosol	52.45	52.29
TraesCS2B01G333900.1	Wheat	cytosol	51.84	51.68
PGSC0003DMT400047408	Potato	cytosol	51.23	51.54
Zm00001d003524_P001	Maize	plastid	51.84	51.37
EES10887	Sorghum	plastid	50.61	50.3
EES10886	Sorghum	cytosol	50.0	49.85
Zm00001d025528_P002	Maize	mitochondrion	52.45	49.71
EES10888	Sorghum	mitochondrion, plastid	50.61	49.7
KXG26406	Sorghum	cytosol, peroxisome, plastid	50.31	49.7
TraesCS2B01G547800.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	48.77	49.38
PGSC0003DMT400092283	Potato	cytosol	34.05	49.12
Zm00001d005932_P001	Maize	cytosol	51.23	48.69
Os04t0447500-01	Rice	plastid	48.77	47.75
Os04t0447700-01	Rice	mitochondrion	52.15	47.62
KXG26405	Sorghum	plastid	51.23	46.39
PGSC0003DMT400022952	Potato	cytosol	45.09	46.37
PGSC0003DMT400022949	Potato	cytosol, peroxisome, plastid	45.09	45.65
TraesCS2B01G333800.1	Wheat	plastid	50.61	44.84
Zm00001d003525_P001	Maize	cytosol, mitochondrion, peroxisome, plastid	49.08	44.44
HORVU2Hr1G078570.8	Barley	plastid	50.31	44.2
PGSC0003DMT400087169	Potato	cytosol, peroxisome, plastid	30.06	42.42
PGSC0003DMT400038402	Potato	cytoskeleton, cytosol, peroxisome	39.88	41.27
PGSC0003DMT400091735	Potato	cytoskeleton, cytosol, peroxisome	39.26	40.63
PGSC0003DMT400089951	Potato	cytoskeleton, cytosol, peroxisome	39.26	40.63
PGSC0003DMT400030366	Potato	cytosol	37.73	38.56
PGSC0003DMT400004180	Potato	cytosol, peroxisome, plastid	33.44	35.28

Protein Annotations

EntrezGene:102580537	Gene3D:3.20.20.100	MapMan:50.1.1	InterPro:Aldo/ket_reductase_CS	InterPro:Aldo/keto_reductase	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPR036812
UniProt:M1C2G6	InterPro:NADP_OxRdtase_dom	InterPro:NADP_OxRdtase_dom_sf	PFAM:PF00248	EnsemblPlantsGene:PGSC0003DMG400022641	PGSC:PGSC0003DMG400022641
EnsemblPlants:PGSC0003DMT400058309	PIRSF:PIRSF000097	PRINTS:PR00069	ScanProsite:PS00062	ScanProsite:PS00063	ScanProsite:PS00798
PANTHER:PTHR11732	PANTHER:PTHR11732:SF382	SUPFAM:SSF51430	UniParc:UPI000296B104	RefSeq:XP_006357206.1	:

Description

Reductase 2 [Source:PGSC_GENE;Acc:PGSC0003DMG400022641]

Coordinates

chr5:-:6774621..6777054

Molecular Weight (calculated)

36807.1 Da

IEP (calculated)

5.480

GRAVY (calculated)

-0.308

Length

326 amino acids

Sequence
(BLAST)

001: MNPEQQQTPM PAIPMAAGCR RIPALGFGTA ADPPVEPEIV RSAVVEAIEV GYRHFDTAAL YNSEEALGEA INEAINDGFV ESREQLFITS KLWCSDAHPQ
101: HVLPALNKTL RNLKMDYIDL YLIHWPLSSK PGIHEYPIKK EDFIPMDFKS VWVAMEECHK LGLTKFIGVS NFSCKNLADV LATAKIPPAV NQVEVNPCWQ
201: QQKLREFCKR NGVLVVGYSS LGSIGTFYGT NRVMESEVLR EIAKARGKTV AQVALRWGYE QGIGVVVKSY NKERMKQNLE IFDWSLNDDE CRKISEIPQS
301: RVCLGKDYTS PYGPYKTTEE LWDEEL

Best Arabidopsis Sequence Match ( AT1G59960.1 )
(BLAST)

001: MSLTTVPTLA IRSGPSGHHS MPVLGFGTAA SPLPEPTMLK ETVIEAIKLG YRHFDTSPRY QTEEPIGEAL AEAVSLGLVR SRSEFFVTTK LWCADAHGGL
101: VVPAIKRSLK NLKLDYLDLY IIHWPVSSKP GKYKFPIDED DFMPMDFEVV WSEMEECQRL GLAKCIGVSN FSCKKLQHIL SIATIPPSVN QVEMSPIWQQ
201: RKLRELCRSN DIVVTAYSVL GSRGAFWGTP KIMESDVLKE IAEAKEKTVA QVSMRWAYEQ GVSMVVKSFT KERLEENLKI FDWSLTEDET QRISTEIPQF
301: RNVHGEVYTS KKGPIKSVAE MWDGEI

Arabidopsis Description

NAD(P)-linked oxidoreductase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SXC0]
SUBAcon: [mitochondrion,peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.